Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 AP000593.1-201ENST00000393668 712 ntBASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 TOB2P1-201ENST00000469761 992 ntBASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 IGHV3-41-201ENST00000613121 348 ntBASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 AL163051.1-201ENST00000569214 1512 ntBASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.08■□□□□ 0.64
SH3RF2Q8TEC5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 NUS1P1-201ENST00000446295 882 ntBASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SH3RF2Q8TEC5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SH3RF2Q8TEC5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 AC111152.3-201ENST00000569699 673 ntBASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3RF2Q8TEC5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms