Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC099778.1-201ENST00000568593 1911 ntBASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 AC073592.4-201ENST00000623827 446 ntBASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 AC093028.1-201ENST00000622998 982 ntBASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 MIR770-201ENST00000390219 98 ntBASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 SNHG9-202ENST00000564014 471 ntBASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 AL096865.1-201ENST00000606796 927 ntBASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 AC009154.2-201ENST00000621177 724 ntBASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALMS1Q8TCU4 AC079776.2-201ENST00000641154 1609 ntBASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 ELL2P1-201ENST00000413990 1906 ntBASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 AC092364.2-202ENST00000597012 1073 ntBASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 AC005593.1-201ENST00000624894 515 ntBASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 COX20P2-201ENST00000452636 358 ntBASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.34□□□□□ -0.43
ALMS1Q8TCU4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.33□□□□□ -0.43
ALMS1Q8TCU4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
ALMS1Q8TCU4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.33□□□□□ -0.43
ALMS1Q8TCU4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
ALMS1Q8TCU4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
ALMS1Q8TCU4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.43
ALMS1Q8TCU4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 HCG4B-203ENST00000450128 991 ntBASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 OR7E47P-204ENST00000575924 449 ntBASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 MTDHP4-201ENST00000600287 670 ntBASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms