Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.22■□□□□ 0.51
RFWD2Q8NHY2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 AC092368.3-202ENST00000574180 1591 ntBASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.21■□□□□ 0.51
RFWD2Q8NHY2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
RFWD2Q8NHY2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
RFWD2Q8NHY2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 AC083880.1-201ENST00000608266 535 ntBASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 AC120498.8-201ENST00000614275 531 ntBASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 MYC-209ENST00000641252 345 ntBASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD2Q8NHY2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 AC142086.2-201ENST00000569753 217 ntBASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD2Q8NHY2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 AC022211.2-201ENST00000585075 2527 ntBASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms