Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RPS2P55-201ENST00000397318 883 ntBASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 GCSHP5-201ENST00000443090 522 ntBASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 AC107956.1-201ENST00000494359 873 ntBASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 AC097488.1-201ENST00000507834 756 ntBASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLHC1Q8NHS4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 MCCD1P1-208ENST00000445732 328 ntBASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 AC116562.2-201ENST00000507042 360 ntBASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 REXO1L9P-201ENST00000604264 2108 ntBASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.69■□□□□ 0.42
CLHC1Q8NHS4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 ABHD17AP1-201ENST00000358206 933 ntBASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 REXO1L10P-201ENST00000615707 1290 ntBASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 REXO1L12P-201ENST00000622156 912 ntBASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLHC1Q8NHS4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 MIR564-202ENST00000385049 94 ntBASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 CRYGFP-201ENST00000418459 633 ntBASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 UBE2SP1-201ENST00000450587 669 ntBASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms