Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 AC079602.3-201ENST00000623931 403 ntBASIC18.87■□□□□ 0.61
RTL3Q8N8U3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.86■□□□□ 0.61
RTL3Q8N8U3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 AC112907.2-201ENST00000448639 330 ntBASIC18.85■□□□□ 0.61
RTL3Q8N8U3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 AL136038.4-201ENST00000603606 1261 ntBASIC18.85■□□□□ 0.61
RTL3Q8N8U3 HYMAI.1-201ENST00000620949 238 ntBASIC18.85■□□□□ 0.61
RTL3Q8N8U3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL3Q8N8U3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 AL391807.1-203ENST00000604392 2365 ntBASIC18.84■□□□□ 0.61
RTL3Q8N8U3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.84■□□□□ 0.61
RTL3Q8N8U3 AC092597.1-201ENST00000487352 616 ntBASIC18.84■□□□□ 0.61
RTL3Q8N8U3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.84■□□□□ 0.61
RTL3Q8N8U3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.84■□□□□ 0.61
RTL3Q8N8U3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 GMCL1P1-201ENST00000463439 1581 ntBASIC18.84■□□□□ 0.61
RTL3Q8N8U3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTL3Q8N8U3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RTL3Q8N8U3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTL3Q8N8U3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
RTL3Q8N8U3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.83■□□□□ 0.61
RTL3Q8N8U3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.83■□□□□ 0.61
RTL3Q8N8U3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTL3Q8N8U3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.83■□□□□ 0.61
RTL3Q8N8U3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTL3Q8N8U3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms