Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 AC093525.10-201ENST00000625130 1569 ntBASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 Z98044.1-201ENST00000632503 1764 ntBASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC33Q8N5R6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 GPAT2P1-201ENST00000444924 1672 ntBASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 KRT8P32-201ENST00000512863 1461 ntBASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 HCG4P8-203ENST00000443049 980 ntBASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 ZNF444P1-201ENST00000559497 298 ntBASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 AC083849.1-201ENST00000615227 514 ntBASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 AC068587.9-201ENST00000641814 219 ntBASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 LETM1P2-201ENST00000597330 2178 ntBASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC33Q8N5R6 AC008556.1-201ENST00000610908 2040 ntBASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 AL136038.3-201ENST00000561909 1096 ntBASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 NEK4P2-201ENST00000580004 1012 ntBASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 AC069148.1-201ENST00000608741 768 ntBASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 LINC01311-201ENST00000565162 1445 ntBASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC33Q8N5R6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms