Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 AP001269.4-201ENST00000609611 512 ntBASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 AL691403.2-201ENST00000618460 490 ntBASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A3Q8N4M1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 AC145285.3-201ENST00000564603 959 ntBASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 AC055717.3-201ENST00000622967 595 ntBASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A3Q8N4M1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 AC068472.1-201ENST00000474589 881 ntBASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 AC113404.2-201ENST00000507884 177 ntBASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 IGHV3-22-201ENST00000520721 359 ntBASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 AC112777.1-201ENST00000540175 1423 ntBASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC44A3Q8N4M1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 AC104109.2-201ENST00000602919 1418 ntBASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 AC009533.2-201ENST00000543664 586 ntBASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 AC027601.4-201ENST00000611259 610 ntBASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A3Q8N4M1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms