Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 AL512353.2-201ENST00000448759 1962 ntBASIC19.95■□□□□ 0.78
VPS52Q8N1B4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 KRT18P1-202ENST00000452408 1331 ntBASIC19.95■□□□□ 0.78
VPS52Q8N1B4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 AC004870.1-201ENST00000315132 882 ntBASIC19.94■□□□□ 0.78
VPS52Q8N1B4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 UNC93B7-201ENST00000509439 705 ntBASIC19.94■□□□□ 0.78
VPS52Q8N1B4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS52Q8N1B4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.93■□□□□ 0.78
VPS52Q8N1B4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 NUS1P1-201ENST00000446295 882 ntBASIC19.93■□□□□ 0.78
VPS52Q8N1B4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 RNF126P1-202ENST00000569893 925 ntBASIC19.93■□□□□ 0.78
VPS52Q8N1B4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 TEX21P-204ENST00000641479 1693 ntBASIC19.93■□□□□ 0.78
VPS52Q8N1B4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
VPS52Q8N1B4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 KRT8P7-201ENST00000533003 1432 ntBASIC19.92■□□□□ 0.78
VPS52Q8N1B4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS52Q8N1B4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms