Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC146Q8IYE0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC146Q8IYE0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC24.39■■□□□ 1.5
CCDC146Q8IYE0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC146Q8IYE0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC146Q8IYE0 AC009102.3-201ENST00000623118 1491 ntBASIC24.39■■□□□ 1.5
CCDC146Q8IYE0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC24.39■■□□□ 1.5
CCDC146Q8IYE0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC24.39■■□□□ 1.5
CCDC146Q8IYE0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
CCDC146Q8IYE0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC146Q8IYE0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC24.39■■□□□ 1.5
CCDC146Q8IYE0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC146Q8IYE0 MIR149-201ENST00000384879 89 ntBASIC24.39■■□□□ 1.49
CCDC146Q8IYE0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
CCDC146Q8IYE0 AC112907.2-201ENST00000448639 330 ntBASIC24.39■■□□□ 1.49
CCDC146Q8IYE0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC24.39■■□□□ 1.49
CCDC146Q8IYE0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC24.39■■□□□ 1.49
CCDC146Q8IYE0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC24.39■■□□□ 1.49
CCDC146Q8IYE0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC24.39■■□□□ 1.49
CCDC146Q8IYE0 HYMAI.1-201ENST00000620949 238 ntBASIC24.39■■□□□ 1.49
CCDC146Q8IYE0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC24.39■■□□□ 1.49
CCDC146Q8IYE0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC146Q8IYE0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC146Q8IYE0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC146Q8IYE0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC24.39■■□□□ 1.49
CCDC146Q8IYE0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC24.39■■□□□ 1.49
CCDC146Q8IYE0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 COPE-203ENST00000351079 907 ntTSL 2 BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 FAM8A6P-201ENST00000407496 1135 ntBASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC146Q8IYE0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 AC010331.1-201ENST00000611423 582 ntBASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC146Q8IYE0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCDC146Q8IYE0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
CCDC146Q8IYE0 AC020763.4-201ENST00000623414 4170 ntBASIC24.36■■□□□ 1.49
CCDC146Q8IYE0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CCDC146Q8IYE0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CCDC146Q8IYE0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCDC146Q8IYE0 MIR1224-201ENST00000408193 85 ntBASIC24.36■■□□□ 1.49
CCDC146Q8IYE0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CCDC146Q8IYE0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCDC146Q8IYE0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC24.36■■□□□ 1.49
CCDC146Q8IYE0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCDC146Q8IYE0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
CCDC146Q8IYE0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC24.36■■□□□ 1.49
CCDC146Q8IYE0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC24.36■■□□□ 1.49
CCDC146Q8IYE0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
CCDC146Q8IYE0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCDC146Q8IYE0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC146Q8IYE0 LINC01126-201ENST00000623515 1646 ntBASIC24.35■■□□□ 1.49
CCDC146Q8IYE0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC146Q8IYE0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
CCDC146Q8IYE0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC146Q8IYE0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC146Q8IYE0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC146Q8IYE0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC146Q8IYE0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC146Q8IYE0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC146Q8IYE0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC24.35■■□□□ 1.49
CCDC146Q8IYE0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
CCDC146Q8IYE0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC146Q8IYE0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC146Q8IYE0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.35■■□□□ 1.49
CCDC146Q8IYE0 HOMER2P1-201ENST00000455653 964 ntBASIC24.35■■□□□ 1.49
CCDC146Q8IYE0 AC034232.1-201ENST00000506026 1064 ntBASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms