Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 AC024243.1-201ENST00000609234 778 ntBASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 AC097493.4-201ENST00000641197 219 ntBASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 LIN28AP1-201ENST00000429574 405 ntBASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 SEC1P-202ENST00000473944 940 ntBASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 AC010240.3-201ENST00000607688 395 ntBASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 AC012306.2-201ENST00000609350 630 ntBASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 AC141257.4-201ENST00000634557 245 ntBASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 AC136944.6-201ENST00000634818 245 ntBASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 AL354751.1-201ENST00000412768 1863 ntBASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 SDHAP2-201ENST00000455183 2001 ntBASIC20.43■□□□□ 0.86
CCDC65Q8IXS2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 AL390961.4-201ENST00000623958 2535 ntBASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 AL138966.2-201ENST00000621997 464 ntBASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 GMCL1P1-201ENST00000463439 1581 ntBASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC65Q8IXS2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 ABALON-201ENST00000629058 1903 ntBASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 AC005363.2-201ENST00000618631 242 ntBASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms