Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
APLFQ8IW19 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
APLFQ8IW19 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.25■□□□□ 0.51
APLFQ8IW19 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
APLFQ8IW19 LINC01126-201ENST00000623515 1646 ntBASIC18.25■□□□□ 0.51
APLFQ8IW19 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.25■□□□□ 0.51
APLFQ8IW19 LIN28AP1-201ENST00000429574 405 ntBASIC18.25■□□□□ 0.51
APLFQ8IW19 YBX1P10-201ENST00000444752 975 ntBASIC18.25■□□□□ 0.51
APLFQ8IW19 AC104076.2-201ENST00000448912 469 ntBASIC18.25■□□□□ 0.51
APLFQ8IW19 B3GAT3P1-201ENST00000471720 806 ntBASIC18.25■□□□□ 0.51
APLFQ8IW19 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.25■□□□□ 0.51
APLFQ8IW19 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
APLFQ8IW19 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.25■□□□□ 0.51
APLFQ8IW19 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
APLFQ8IW19 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.25■□□□□ 0.51
APLFQ8IW19 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.25■□□□□ 0.51
APLFQ8IW19 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.25■□□□□ 0.51
APLFQ8IW19 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
APLFQ8IW19 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.25■□□□□ 0.51
APLFQ8IW19 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.25■□□□□ 0.51
APLFQ8IW19 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.25■□□□□ 0.51
APLFQ8IW19 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.25■□□□□ 0.51
APLFQ8IW19 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.25■□□□□ 0.51
APLFQ8IW19 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APLFQ8IW19 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
APLFQ8IW19 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APLFQ8IW19 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.24■□□□□ 0.51
APLFQ8IW19 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
APLFQ8IW19 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
APLFQ8IW19 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
APLFQ8IW19 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APLFQ8IW19 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.24■□□□□ 0.51
APLFQ8IW19 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.24■□□□□ 0.51
APLFQ8IW19 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
APLFQ8IW19 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.24■□□□□ 0.51
APLFQ8IW19 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
APLFQ8IW19 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
APLFQ8IW19 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APLFQ8IW19 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APLFQ8IW19 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APLFQ8IW19 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.24■□□□□ 0.51
APLFQ8IW19 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APLFQ8IW19 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
APLFQ8IW19 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APLFQ8IW19 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
APLFQ8IW19 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.24■□□□□ 0.51
APLFQ8IW19 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.24■□□□□ 0.51
APLFQ8IW19 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
APLFQ8IW19 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
APLFQ8IW19 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
APLFQ8IW19 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
APLFQ8IW19 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
APLFQ8IW19 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.23■□□□□ 0.51
APLFQ8IW19 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.23■□□□□ 0.51
APLFQ8IW19 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APLFQ8IW19 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APLFQ8IW19 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.23■□□□□ 0.51
APLFQ8IW19 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APLFQ8IW19 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
APLFQ8IW19 TFP1-202ENST00000475455 1573 ntBASIC18.23■□□□□ 0.51
APLFQ8IW19 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
APLFQ8IW19 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.23■□□□□ 0.51
APLFQ8IW19 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
APLFQ8IW19 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APLFQ8IW19 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
APLFQ8IW19 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.23■□□□□ 0.51
APLFQ8IW19 AC128688.1-201ENST00000487626 519 ntBASIC18.23■□□□□ 0.51
APLFQ8IW19 KRT18P16-201ENST00000510337 1294 ntBASIC18.23■□□□□ 0.51
APLFQ8IW19 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
APLFQ8IW19 AC010203.1-204ENST00000548782 407 ntBASIC18.23■□□□□ 0.51
APLFQ8IW19 NTF6B-201ENST00000591913 560 ntBASIC18.23■□□□□ 0.51
APLFQ8IW19 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
APLFQ8IW19 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.23■□□□□ 0.51
APLFQ8IW19 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.23■□□□□ 0.51
APLFQ8IW19 AC131212.4-201ENST00000623606 975 ntBASIC18.23■□□□□ 0.51
APLFQ8IW19 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.23■□□□□ 0.51
APLFQ8IW19 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms