Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.62■□□□□ 0.57
PACS1Q6VY07 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PACS1Q6VY07 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS1Q6VY07 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS1Q6VY07 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PACS1Q6VY07 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS1Q6VY07 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.61■□□□□ 0.57
PACS1Q6VY07 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS1Q6VY07 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS1Q6VY07 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS1Q6VY07 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.61■□□□□ 0.57
PACS1Q6VY07 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.61■□□□□ 0.57
PACS1Q6VY07 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PACS1Q6VY07 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PACS1Q6VY07 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS1Q6VY07 MYLKP1-201ENST00000509077 1580 ntBASIC18.61■□□□□ 0.57
PACS1Q6VY07 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PACS1Q6VY07 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.61■□□□□ 0.57
PACS1Q6VY07 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS1Q6VY07 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.61■□□□□ 0.57
PACS1Q6VY07 TSPY14P-201ENST00000303979 915 ntBASIC18.61■□□□□ 0.57
PACS1Q6VY07 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PACS1Q6VY07 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.61■□□□□ 0.57
PACS1Q6VY07 CCR12P-201ENST00000446203 998 ntBASIC18.61■□□□□ 0.57
PACS1Q6VY07 TSPY17P-201ENST00000450329 467 ntBASIC18.61■□□□□ 0.57
PACS1Q6VY07 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.61■□□□□ 0.57
PACS1Q6VY07 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PACS1Q6VY07 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PACS1Q6VY07 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PACS1Q6VY07 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PACS1Q6VY07 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.61■□□□□ 0.57
PACS1Q6VY07 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.61■□□□□ 0.57
PACS1Q6VY07 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS1Q6VY07 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.61■□□□□ 0.57
PACS1Q6VY07 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PACS1Q6VY07 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.61■□□□□ 0.57
PACS1Q6VY07 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.6■□□□□ 0.57
PACS1Q6VY07 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PACS1Q6VY07 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.6■□□□□ 0.57
PACS1Q6VY07 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PACS1Q6VY07 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PACS1Q6VY07 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.6■□□□□ 0.57
PACS1Q6VY07 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PACS1Q6VY07 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PACS1Q6VY07 MMP23A-201ENST00000234610 1017 ntBASIC18.6■□□□□ 0.57
PACS1Q6VY07 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PACS1Q6VY07 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.6■□□□□ 0.57
PACS1Q6VY07 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.6■□□□□ 0.57
PACS1Q6VY07 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PACS1Q6VY07 BX088651.1-201ENST00000540551 451 ntBASIC18.6■□□□□ 0.57
PACS1Q6VY07 AL353719.1-201ENST00000566847 864 ntBASIC18.6■□□□□ 0.57
PACS1Q6VY07 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PACS1Q6VY07 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PACS1Q6VY07 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PACS1Q6VY07 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PACS1Q6VY07 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.6■□□□□ 0.57
PACS1Q6VY07 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PACS1Q6VY07 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.6■□□□□ 0.57
PACS1Q6VY07 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PACS1Q6VY07 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PACS1Q6VY07 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PACS1Q6VY07 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PACS1Q6VY07 AL109659.2-201ENST00000606809 1674 ntBASIC18.6■□□□□ 0.57
PACS1Q6VY07 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.6■□□□□ 0.57
PACS1Q6VY07 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PACS1Q6VY07 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PACS1Q6VY07 ESPNP-201ENST00000270691 2015 ntBASIC18.59■□□□□ 0.57
PACS1Q6VY07 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 AC092338.2-201ENST00000568827 1415 ntBASIC18.59■□□□□ 0.57
PACS1Q6VY07 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.59■□□□□ 0.57
PACS1Q6VY07 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.59■□□□□ 0.57
PACS1Q6VY07 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PACS1Q6VY07 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PACS1Q6VY07 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 EGLN1P1-201ENST00000531623 762 ntBASIC18.59■□□□□ 0.57
PACS1Q6VY07 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PACS1Q6VY07 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PACS1Q6VY07 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PACS1Q6VY07 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PACS1Q6VY07 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PACS1Q6VY07 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PACS1Q6VY07 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms