Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.29□□□□□ -0.12
KCNIP4Q6PIL6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP4Q6PIL6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP4Q6PIL6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 MIR600HG-201ENST00000449175 5984 ntBASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 AL356309.3-201ENST00000624132 1934 ntBASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP4Q6PIL6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.27□□□□□ -0.12
KCNIP4Q6PIL6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP4Q6PIL6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP4Q6PIL6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
KCNIP4Q6PIL6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.27□□□□□ -0.12
KCNIP4Q6PIL6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
KCNIP4Q6PIL6 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP4Q6PIL6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP4Q6PIL6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP4Q6PIL6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.27□□□□□ -0.12
KCNIP4Q6PIL6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP4Q6PIL6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP4Q6PIL6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP4Q6PIL6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP4Q6PIL6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP4Q6PIL6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 KRT19P1-201ENST00000405746 1186 ntBASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 KRT18P20-201ENST00000548986 1279 ntBASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 CCDC92B-201ENST00000575506 885 ntBASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 AC022211.2-201ENST00000585075 2527 ntBASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
KCNIP4Q6PIL6 AL365209.1-201ENST00000624418 6473 ntBASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 SDHAP1-207ENST00000440850 2000 ntBASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 KRT18P14-201ENST00000534205 1250 ntBASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP4Q6PIL6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms