Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 RN7SL471P-201ENST00000580476 299 ntBASIC16.05■□□□□ 0.16
C11orf88Q6PI97 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 AL390719.1-204ENST00000412397 1219 ntBASIC16.04■□□□□ 0.16
C11orf88Q6PI97 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 AC008550.1-201ENST00000511500 884 ntBASIC16.04■□□□□ 0.16
C11orf88Q6PI97 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf88Q6PI97 AC009053.2-201ENST00000563701 2365 ntBASIC16.04■□□□□ 0.16
C11orf88Q6PI97 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 RPPH1-201ENST00000516869 333 ntBASIC16.03■□□□□ 0.16
C11orf88Q6PI97 AC068587.6-202ENST00000641839 5619 ntBASIC16.03■□□□□ 0.16
C11orf88Q6PI97 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms