Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF544Q6NX49 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.94■□□□□ 0.3
ZNF544Q6NX49 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.94■□□□□ 0.3
ZNF544Q6NX49 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 IRX1P1-201ENST00000438849 1838 ntBASIC16.93■□□□□ 0.3
ZNF544Q6NX49 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 OR6D1P-203ENST00000641209 4860 ntBASIC16.93■□□□□ 0.3
ZNF544Q6NX49 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 KRT8P8-201ENST00000434750 1448 ntBASIC16.93■□□□□ 0.3
ZNF544Q6NX49 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.93■□□□□ 0.3
ZNF544Q6NX49 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 Z98044.1-201ENST00000632503 1764 ntBASIC16.92■□□□□ 0.3
ZNF544Q6NX49 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
ZNF544Q6NX49 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 FP475955.4-201ENST00000623131 1990 ntBASIC16.91■□□□□ 0.3
ZNF544Q6NX49 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.91■□□□□ 0.3
ZNF544Q6NX49 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 KSR1P1-201ENST00000446298 240 ntBASIC16.91■□□□□ 0.3
ZNF544Q6NX49 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms