Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 COX5BP8-201ENST00000416911 349 ntBASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 AL353135.1-201ENST00000606729 504 ntBASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 AL589182.2-201ENST00000619332 1049 ntBASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF38BQ5VTL8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 FEM1AP1-201ENST00000431297 1995 ntBASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 VN2R19P-201ENST00000442399 1052 ntBASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 UGT1A2P-201ENST00000454886 866 ntBASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 GPR53P-205ENST00000457298 1084 ntBASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 AL596325.1-201ENST00000563991 1082 ntBASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 AC007375.3-201ENST00000600936 2314 ntBASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF38BQ5VTL8 AL109659.2-201ENST00000606809 1674 ntBASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 HCG4B-203ENST00000450128 991 ntBASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 AC025048.6-201ENST00000634326 1161 ntBASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 AC105339.1-204ENST00000636249 355 ntBASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF38BQ5VTL8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 MIR4751-201ENST00000578027 74 ntBASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 AL138831.2-201ENST00000606564 490 ntBASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRPF38BQ5VTL8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF38BQ5VTL8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF38BQ5VTL8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.85■□□□□ 0.77
PRPF38BQ5VTL8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.85■□□□□ 0.77
PRPF38BQ5VTL8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms