Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 AC009154.2-201ENST00000621177 724 ntBASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 AC002310.6-201ENST00000624451 1377 ntBASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
SNAPC4Q5SXM2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SNAPC4Q5SXM2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
SNAPC4Q5SXM2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SNAPC4Q5SXM2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC29.97■■■□□ 2.39
SNAPC4Q5SXM2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SNAPC4Q5SXM2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SNAPC4Q5SXM2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SNAPC4Q5SXM2 AC073621.1-201ENST00000392730 636 ntBASIC29.97■■■□□ 2.39
SNAPC4Q5SXM2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC29.97■■■□□ 2.39
SNAPC4Q5SXM2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC29.97■■■□□ 2.39
SNAPC4Q5SXM2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
SNAPC4Q5SXM2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SNAPC4Q5SXM2 AC005829.1-201ENST00000570002 483 ntBASIC29.97■■■□□ 2.39
SNAPC4Q5SXM2 AC239800.4-201ENST00000603712 296 ntBASIC29.97■■■□□ 2.39
SNAPC4Q5SXM2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC29.97■■■□□ 2.39
SNAPC4Q5SXM2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC29.96■■■□□ 2.39
SNAPC4Q5SXM2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SNAPC4Q5SXM2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
SNAPC4Q5SXM2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC29.96■■■□□ 2.39
SNAPC4Q5SXM2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC29.96■■■□□ 2.39
SNAPC4Q5SXM2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC29.96■■■□□ 2.39
SNAPC4Q5SXM2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
SNAPC4Q5SXM2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
SNAPC4Q5SXM2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SNAPC4Q5SXM2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
SNAPC4Q5SXM2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SNAPC4Q5SXM2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SNAPC4Q5SXM2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC29.95■■■□□ 2.39
SNAPC4Q5SXM2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC29.95■■■□□ 2.39
SNAPC4Q5SXM2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
SNAPC4Q5SXM2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SNAPC4Q5SXM2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC29.95■■■□□ 2.39
SNAPC4Q5SXM2 AL645939.2-201ENST00000427340 991 ntBASIC29.95■■■□□ 2.39
SNAPC4Q5SXM2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SNAPC4Q5SXM2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC29.95■■■□□ 2.39
SNAPC4Q5SXM2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC29.95■■■□□ 2.39
SNAPC4Q5SXM2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC29.95■■■□□ 2.39
SNAPC4Q5SXM2 AC092364.2-202ENST00000597012 1073 ntBASIC29.95■■■□□ 2.39
SNAPC4Q5SXM2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC29.95■■■□□ 2.39
SNAPC4Q5SXM2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC29.95■■■□□ 2.39
SNAPC4Q5SXM2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
SNAPC4Q5SXM2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.38
SNAPC4Q5SXM2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC29.95■■■□□ 2.38
SNAPC4Q5SXM2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
SNAPC4Q5SXM2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
SNAPC4Q5SXM2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC29.95■■■□□ 2.38
SNAPC4Q5SXM2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC29.95■■■□□ 2.38
SNAPC4Q5SXM2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC29.95■■■□□ 2.38
SNAPC4Q5SXM2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SNAPC4Q5SXM2 ATP6V0CP3-201ENST00000417255 467 ntBASIC29.94■■■□□ 2.38
SNAPC4Q5SXM2 SNHG9-202ENST00000564014 471 ntBASIC29.94■■■□□ 2.38
SNAPC4Q5SXM2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC29.94■■■□□ 2.38
SNAPC4Q5SXM2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SNAPC4Q5SXM2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SNAPC4Q5SXM2 AL024508.2-201ENST00000607749 1894 ntBASIC29.94■■■□□ 2.38
SNAPC4Q5SXM2 HEIH-201ENST00000623091 1652 ntBASIC29.94■■■□□ 2.38
SNAPC4Q5SXM2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
SNAPC4Q5SXM2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SNAPC4Q5SXM2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 AC106028.4-201ENST00000614509 607 ntBASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 CNN2P11-201ENST00000429351 262 ntBASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 AC011467.4-201ENST00000594891 528 ntBASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC29.93■■■□□ 2.38
SNAPC4Q5SXM2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC29.92■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms