Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 AL109659.2-201ENST00000606809 1674 ntBASIC17.93■□□□□ 0.46
SGO1Q5FBB7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 FZD10-202ENST00000539839 3282 ntBASIC17.93■□□□□ 0.46
SGO1Q5FBB7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 TSPY7P-201ENST00000431358 1114 ntBASIC17.93■□□□□ 0.46
SGO1Q5FBB7 MCCD1P1-208ENST00000445732 328 ntBASIC17.93■□□□□ 0.46
SGO1Q5FBB7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 AP003071.4-201ENST00000562276 1284 ntBASIC17.93■□□□□ 0.46
SGO1Q5FBB7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SGO1Q5FBB7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 KRT8P45-201ENST00000414328 1447 ntBASIC17.92■□□□□ 0.46
SGO1Q5FBB7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SGO1Q5FBB7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 MYLKP1-201ENST00000509077 1580 ntBASIC17.91■□□□□ 0.46
SGO1Q5FBB7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 AC135776.1-201ENST00000319817 2481 ntBASIC17.91■□□□□ 0.46
SGO1Q5FBB7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 AC008550.1-201ENST00000511500 884 ntBASIC17.91■□□□□ 0.46
SGO1Q5FBB7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.91■□□□□ 0.46
SGO1Q5FBB7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SGO1Q5FBB7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms