Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 RNF152P1-201ENST00000397754 604 ntBASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 AC104417.2-201ENST00000562989 1793 ntBASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.13■□□□□ 0.17
CHRFAM7AQ494W8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 FAM8A6P-201ENST00000407496 1135 ntBASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 HMGA1P5-201ENST00000412453 271 ntBASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.12■□□□□ 0.17
CHRFAM7AQ494W8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 BICD1-207ENST00000551848 1962 ntBASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 AC117947.1-201ENST00000427448 529 ntBASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 AC009947.2-201ENST00000444014 672 ntBASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 AL445675.2-201ENST00000620291 557 ntBASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms