Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 GK-202ENST00000378941 458 ntTSL 3 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 SLC25A24-204ENST00000569674 2357 ntBASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 INTS4P1-201ENST00000438455 1935 ntBASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 AC063926.2-201ENST00000623766 1308 ntBASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 ABCD1P5-201ENST00000445663 754 ntBASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 AC093028.1-201ENST00000622998 982 ntBASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO4Q2I0M5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 AC107918.4-202ENST00000641623 219 ntBASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 ZNF815P-204ENST00000434898 1737 ntBASIC17.77■□□□□ 0.44
RSPO4Q2I0M5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RSPO4Q2I0M5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RSPO4Q2I0M5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RSPO4Q2I0M5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.77■□□□□ 0.43
RSPO4Q2I0M5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RSPO4Q2I0M5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 AC009237.14-201ENST00000609975 1594 ntBASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 MTDHP4-201ENST00000600287 670 ntBASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms