Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST3H3Q16695 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.25■□□□□ 0.19
HIST3H3Q16695 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST3H3Q16695 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
HIST3H3Q16695 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST3H3Q16695 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST3H3Q16695 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.25■□□□□ 0.19
HIST3H3Q16695 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 AC113347.1-201ENST00000413321 391 ntBASIC16.24■□□□□ 0.19
HIST3H3Q16695 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 MIR3917-201ENST00000580971 93 ntBASIC16.24■□□□□ 0.19
HIST3H3Q16695 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIST3H3Q16695 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
HIST3H3Q16695 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST3H3Q16695 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HIST3H3Q16695 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.23■□□□□ 0.19
HIST3H3Q16695 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST3H3Q16695 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.23■□□□□ 0.19
HIST3H3Q16695 AC073508.3-201ENST00000619697 1419 ntBASIC16.23■□□□□ 0.19
HIST3H3Q16695 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST3H3Q16695 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HIST3H3Q16695 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.23■□□□□ 0.19
HIST3H3Q16695 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
HIST3H3Q16695 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST3H3Q16695 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST3H3Q16695 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST3H3Q16695 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 AC092865.7-201ENST00000641832 219 ntBASIC16.23■□□□□ 0.19
HIST3H3Q16695 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST3H3Q16695 NOC2LP1-202ENST00000452600 2235 ntBASIC16.23■□□□□ 0.19
HIST3H3Q16695 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.23■□□□□ 0.19
HIST3H3Q16695 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST3H3Q16695 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H3Q16695 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H3Q16695 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.22■□□□□ 0.19
HIST3H3Q16695 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HIST3H3Q16695 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.22■□□□□ 0.19
HIST3H3Q16695 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H3Q16695 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HIST3H3Q16695 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HIST3H3Q16695 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.22■□□□□ 0.19
HIST3H3Q16695 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H3Q16695 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H3Q16695 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
HIST3H3Q16695 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H3Q16695 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.22■□□□□ 0.19
HIST3H3Q16695 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.22■□□□□ 0.19
HIST3H3Q16695 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HIST3H3Q16695 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.22■□□□□ 0.19
HIST3H3Q16695 AC005363.2-201ENST00000618631 242 ntBASIC16.22■□□□□ 0.19
HIST3H3Q16695 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H3Q16695 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
HIST3H3Q16695 PHGDH-209ENST00000641074 1780 ntBASIC16.22■□□□□ 0.19
HIST3H3Q16695 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms