Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GCNT1Q02742 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GCNT1Q02742 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GCNT1Q02742 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GCNT1Q02742 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GCNT1Q02742 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GCNT1Q02742 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GCNT1Q02742 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GCNT1Q02742 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.66■□□□□ 0.74
GCNT1Q02742 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
GCNT1Q02742 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.66■□□□□ 0.74
GCNT1Q02742 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GCNT1Q02742 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GCNT1Q02742 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.66■□□□□ 0.74
GCNT1Q02742 COX11P1-201ENST00000489116 835 ntBASIC19.66■□□□□ 0.74
GCNT1Q02742 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.66■□□□□ 0.74
GCNT1Q02742 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.66■□□□□ 0.74
GCNT1Q02742 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.66■□□□□ 0.74
GCNT1Q02742 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
GCNT1Q02742 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.66■□□□□ 0.74
GCNT1Q02742 GCSHP2-201ENST00000560971 527 ntBASIC19.66■□□□□ 0.74
GCNT1Q02742 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.66■□□□□ 0.74
GCNT1Q02742 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GCNT1Q02742 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.66■□□□□ 0.74
GCNT1Q02742 AL024508.2-201ENST00000607749 1894 ntBASIC19.66■□□□□ 0.74
GCNT1Q02742 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GCNT1Q02742 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GCNT1Q02742 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GCNT1Q02742 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GCNT1Q02742 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GCNT1Q02742 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.66■□□□□ 0.74
GCNT1Q02742 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
GCNT1Q02742 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GCNT1Q02742 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.65■□□□□ 0.74
GCNT1Q02742 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.65■□□□□ 0.74
GCNT1Q02742 PHGDH-209ENST00000641074 1780 ntBASIC19.65■□□□□ 0.74
GCNT1Q02742 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GCNT1Q02742 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GCNT1Q02742 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
GCNT1Q02742 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
GCNT1Q02742 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
GCNT1Q02742 BX664615.1-201ENST00000443558 458 ntBASIC19.65■□□□□ 0.74
GCNT1Q02742 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GCNT1Q02742 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GCNT1Q02742 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.65■□□□□ 0.74
GCNT1Q02742 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
GCNT1Q02742 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GCNT1Q02742 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
GCNT1Q02742 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.65■□□□□ 0.74
GCNT1Q02742 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.65■□□□□ 0.74
GCNT1Q02742 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
GCNT1Q02742 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GCNT1Q02742 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GCNT1Q02742 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.65■□□□□ 0.74
GCNT1Q02742 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
GCNT1Q02742 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GCNT1Q02742 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.65■□□□□ 0.74
GCNT1Q02742 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
GCNT1Q02742 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GCNT1Q02742 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.65■□□□□ 0.74
GCNT1Q02742 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.65■□□□□ 0.74
GCNT1Q02742 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
GCNT1Q02742 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
GCNT1Q02742 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
GCNT1Q02742 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.64■□□□□ 0.74
GCNT1Q02742 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
GCNT1Q02742 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.64■□□□□ 0.73
GCNT1Q02742 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GCNT1Q02742 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.64■□□□□ 0.73
GCNT1Q02742 AL023973.1-201ENST00000624619 620 ntBASIC19.64■□□□□ 0.73
GCNT1Q02742 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.64■□□□□ 0.73
GCNT1Q02742 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GCNT1Q02742 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GCNT1Q02742 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GCNT1Q02742 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GCNT1Q02742 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GCNT1Q02742 LINC01126-201ENST00000623515 1646 ntBASIC19.64■□□□□ 0.73
GCNT1Q02742 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
GCNT1Q02742 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GCNT1Q02742 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GCNT1Q02742 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
GCNT1Q02742 NOC2LP1-202ENST00000452600 2235 ntBASIC19.64■□□□□ 0.73
GCNT1Q02742 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.64■□□□□ 0.73
GCNT1Q02742 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.64■□□□□ 0.73
GCNT1Q02742 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
GCNT1Q02742 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GCNT1Q02742 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
GCNT1Q02742 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
GCNT1Q02742 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GCNT1Q02742 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GCNT1Q02742 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GCNT1Q02742 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.63■□□□□ 0.73
GCNT1Q02742 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GCNT1Q02742 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GCNT1Q02742 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
GCNT1Q02742 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
GCNT1Q02742 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GCNT1Q02742 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.63■□□□□ 0.73
GCNT1Q02742 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.63■□□□□ 0.73
GCNT1Q02742 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms