Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 MIR4651-201ENST00000582622 73 ntBASIC14.12□□□□□ -0.15
HIST1H1AQ02539 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST1H1AQ02539 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 AL353807.1-201ENST00000427475 662 ntBASIC14.11□□□□□ -0.15
HIST1H1AQ02539 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 FAM197Y4-202ENST00000622692 608 ntBASIC14.11□□□□□ -0.15
HIST1H1AQ02539 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H1AQ02539 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 ABALON-201ENST00000629058 1903 ntBASIC14.1□□□□□ -0.15
HIST1H1AQ02539 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 AC004980.1-204ENST00000429707 299 ntBASIC14.1□□□□□ -0.15
HIST1H1AQ02539 KSR1P1-201ENST00000446298 240 ntBASIC14.1□□□□□ -0.15
HIST1H1AQ02539 FAM201B-201ENST00000458407 597 ntBASIC14.1□□□□□ -0.15
HIST1H1AQ02539 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1AQ02539 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1AQ02539 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1AQ02539 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1AQ02539 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1AQ02539 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1AQ02539 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HIST1H1AQ02539 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HIST1H1AQ02539 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1AQ02539 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms