Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 DBET-201ENST00000630918 3363 ntBASIC19.3■□□□□ 0.68
CBX1P83916 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CBX1P83916 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBX1P83916 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CBX1P83916 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBX1P83916 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.3■□□□□ 0.68
CBX1P83916 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBX1P83916 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.3■□□□□ 0.68
CBX1P83916 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.29■□□□□ 0.68
CBX1P83916 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CBX1P83916 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX1P83916 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.29■□□□□ 0.68
CBX1P83916 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CBX1P83916 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CBX1P83916 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.29■□□□□ 0.68
CBX1P83916 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.29■□□□□ 0.68
CBX1P83916 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CBX1P83916 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX1P83916 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX1P83916 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CBX1P83916 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX1P83916 UNC93B8-201ENST00000511903 705 ntBASIC19.29■□□□□ 0.68
CBX1P83916 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.29■□□□□ 0.68
CBX1P83916 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CBX1P83916 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CBX1P83916 AL031963.3-201ENST00000606441 850 ntBASIC19.29■□□□□ 0.68
CBX1P83916 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.29■□□□□ 0.68
CBX1P83916 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CBX1P83916 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX1P83916 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CBX1P83916 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX1P83916 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CBX1P83916 AC026691.1-201ENST00000602502 2017 ntBASIC19.29■□□□□ 0.68
CBX1P83916 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CBX1P83916 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
CBX1P83916 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.28■□□□□ 0.68
CBX1P83916 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CBX1P83916 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CBX1P83916 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.28■□□□□ 0.68
CBX1P83916 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CBX1P83916 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CBX1P83916 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 SLC47A1P1-202ENST00000449666 945 ntBASIC19.28■□□□□ 0.68
CBX1P83916 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 FLJ13224-201ENST00000313737 1514 ntBASIC19.28■□□□□ 0.68
CBX1P83916 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.28■□□□□ 0.68
CBX1P83916 PAUPAR-201ENST00000630360 2965 ntBASIC19.28■□□□□ 0.68
CBX1P83916 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CBX1P83916 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.28■□□□□ 0.68
CBX1P83916 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBX1P83916 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.27■□□□□ 0.68
CBX1P83916 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.27■□□□□ 0.68
CBX1P83916 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CBX1P83916 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CBX1P83916 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.27■□□□□ 0.68
CBX1P83916 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.27■□□□□ 0.68
CBX1P83916 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CBX1P83916 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CBX1P83916 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CBX1P83916 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
CBX1P83916 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.27■□□□□ 0.68
CBX1P83916 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CBX1P83916 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CBX1P83916 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CBX1P83916 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.27■□□□□ 0.68
CBX1P83916 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CBX1P83916 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CBX1P83916 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.27■□□□□ 0.68
CBX1P83916 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.27■□□□□ 0.68
CBX1P83916 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CBX1P83916 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CBX1P83916 AC092171.4-201ENST00000609130 632 ntBASIC19.27■□□□□ 0.68
CBX1P83916 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
CBX1P83916 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CBX1P83916 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.27■□□□□ 0.68
CBX1P83916 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.27■□□□□ 0.67
CBX1P83916 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CBX1P83916 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CBX1P83916 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
CBX1P83916 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CBX1P83916 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CBX1P83916 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms