Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.85□□□□□ -0.03
CX3CL1P78423 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.85□□□□□ -0.03
CX3CL1P78423 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.85□□□□□ -0.03
CX3CL1P78423 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CL1P78423 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.85□□□□□ -0.03
CX3CL1P78423 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.85□□□□□ -0.03
CX3CL1P78423 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.85□□□□□ -0.03
CX3CL1P78423 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.85□□□□□ -0.03
CX3CL1P78423 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CL1P78423 ANO7L1-203ENST00000602586 1720 ntBASIC14.85□□□□□ -0.03
CX3CL1P78423 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CL1P78423 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CL1P78423 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.85□□□□□ -0.03
CX3CL1P78423 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.85□□□□□ -0.03
CX3CL1P78423 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CL1P78423 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CX3CL1P78423 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CL1P78423 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CX3CL1P78423 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CL1P78423 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CL1P78423 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CL1P78423 AL357033.4-201ENST00000617703 1807 ntBASIC14.85□□□□□ -0.03
CX3CL1P78423 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CX3CL1P78423 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CL1P78423 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CL1P78423 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CL1P78423 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.84□□□□□ -0.03
CX3CL1P78423 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.84□□□□□ -0.03
CX3CL1P78423 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CX3CL1P78423 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CX3CL1P78423 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CX3CL1P78423 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CX3CL1P78423 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.84□□□□□ -0.03
CX3CL1P78423 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 BICD1-207ENST00000551848 1962 ntBASIC14.84□□□□□ -0.03
CX3CL1P78423 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.84□□□□□ -0.03
CX3CL1P78423 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.84□□□□□ -0.03
CX3CL1P78423 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.84□□□□□ -0.03
CX3CL1P78423 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.84□□□□□ -0.03
CX3CL1P78423 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.84□□□□□ -0.03
CX3CL1P78423 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.84□□□□□ -0.03
CX3CL1P78423 MIR4674-201ENST00000582457 87 ntBASIC14.84□□□□□ -0.03
CX3CL1P78423 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.84□□□□□ -0.03
CX3CL1P78423 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 OR6D1P-202ENST00000641007 5290 ntBASIC14.84□□□□□ -0.03
CX3CL1P78423 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CX3CL1P78423 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CX3CL1P78423 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.84□□□□□ -0.03
CX3CL1P78423 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CX3CL1P78423 AC068880.1-201ENST00000507289 2297 ntBASIC14.83□□□□□ -0.03
CX3CL1P78423 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CX3CL1P78423 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CX3CL1P78423 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CX3CL1P78423 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CX3CL1P78423 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
CX3CL1P78423 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CX3CL1P78423 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CX3CL1P78423 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CX3CL1P78423 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CX3CL1P78423 AL354751.1-201ENST00000412768 1863 ntBASIC14.83□□□□□ -0.04
CX3CL1P78423 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.83□□□□□ -0.04
CX3CL1P78423 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CX3CL1P78423 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CX3CL1P78423 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CX3CL1P78423 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CX3CL1P78423 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.83□□□□□ -0.04
CX3CL1P78423 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CX3CL1P78423 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.83□□□□□ -0.04
CX3CL1P78423 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.83□□□□□ -0.04
CX3CL1P78423 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.83□□□□□ -0.04
CX3CL1P78423 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.83□□□□□ -0.04
CX3CL1P78423 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.83□□□□□ -0.04
CX3CL1P78423 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CX3CL1P78423 AC010653.2-201ENST00000623505 997 ntBASIC14.83□□□□□ -0.04
CX3CL1P78423 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CX3CL1P78423 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CX3CL1P78423 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CX3CL1P78423 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms