Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.47■□□□□ 0.39
RAE1P78406 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.47■□□□□ 0.39
RAE1P78406 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.47■□□□□ 0.39
RAE1P78406 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.47■□□□□ 0.39
RAE1P78406 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.47■□□□□ 0.39
RAE1P78406 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.47■□□□□ 0.39
RAE1P78406 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RAE1P78406 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
RAE1P78406 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
RAE1P78406 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.47■□□□□ 0.39
RAE1P78406 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.47■□□□□ 0.39
RAE1P78406 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RAE1P78406 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.47■□□□□ 0.39
RAE1P78406 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAE1P78406 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAE1P78406 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RAE1P78406 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RAE1P78406 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAE1P78406 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAE1P78406 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.46■□□□□ 0.39
RAE1P78406 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.46■□□□□ 0.39
RAE1P78406 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAE1P78406 AC026471.1-201ENST00000564629 3026 ntBASIC17.46■□□□□ 0.39
RAE1P78406 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.46■□□□□ 0.39
RAE1P78406 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RAE1P78406 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAE1P78406 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAE1P78406 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAE1P78406 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAE1P78406 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAE1P78406 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAE1P78406 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAE1P78406 AC009947.2-201ENST00000444014 672 ntBASIC17.46■□□□□ 0.39
RAE1P78406 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.46■□□□□ 0.39
RAE1P78406 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.46■□□□□ 0.39
RAE1P78406 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.46■□□□□ 0.39
RAE1P78406 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.46■□□□□ 0.39
RAE1P78406 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAE1P78406 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.46■□□□□ 0.39
RAE1P78406 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAE1P78406 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RAE1P78406 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RAE1P78406 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.46■□□□□ 0.38
RAE1P78406 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RAE1P78406 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
RAE1P78406 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.45■□□□□ 0.38
RAE1P78406 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAE1P78406 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.45■□□□□ 0.38
RAE1P78406 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAE1P78406 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAE1P78406 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.45■□□□□ 0.38
RAE1P78406 SEC1P-202ENST00000473944 940 ntBASIC17.45■□□□□ 0.38
RAE1P78406 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.45■□□□□ 0.38
RAE1P78406 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.45■□□□□ 0.38
RAE1P78406 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.45■□□□□ 0.38
RAE1P78406 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
RAE1P78406 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAE1P78406 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.45■□□□□ 0.38
RAE1P78406 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAE1P78406 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAE1P78406 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAE1P78406 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAE1P78406 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAE1P78406 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAE1P78406 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAE1P78406 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAE1P78406 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAE1P78406 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RAE1P78406 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.44■□□□□ 0.38
RAE1P78406 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAE1P78406 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAE1P78406 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAE1P78406 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RAE1P78406 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAE1P78406 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAE1P78406 PCDHB18P-201ENST00000524813 2368 ntBASIC17.44■□□□□ 0.38
RAE1P78406 AL024508.2-201ENST00000607749 1894 ntBASIC17.44■□□□□ 0.38
RAE1P78406 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAE1P78406 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAE1P78406 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAE1P78406 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAE1P78406 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAE1P78406 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAE1P78406 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms