Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC004408.2-201ENST00000623613 2777 ntBASIC17.62■□□□□ 0.41
VSX2P58304 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VSX2P58304 HBZP1-201ENST00000354915 429 ntBASIC17.62■□□□□ 0.41
VSX2P58304 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.62■□□□□ 0.41
VSX2P58304 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.62■□□□□ 0.41
VSX2P58304 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.62■□□□□ 0.41
VSX2P58304 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.62■□□□□ 0.41
VSX2P58304 ZNF444P1-201ENST00000559497 298 ntBASIC17.62■□□□□ 0.41
VSX2P58304 MIR3180-4-201ENST00000582223 153 ntBASIC17.62■□□□□ 0.41
VSX2P58304 AC079602.3-201ENST00000623931 403 ntBASIC17.62■□□□□ 0.41
VSX2P58304 AL121956.5-201ENST00000625261 221 ntBASIC17.62■□□□□ 0.41
VSX2P58304 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VSX2P58304 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VSX2P58304 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.62■□□□□ 0.41
VSX2P58304 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.62■□□□□ 0.41
VSX2P58304 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VSX2P58304 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VSX2P58304 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
VSX2P58304 CROCCP3-202ENST00000420820 1947 ntBASIC17.62■□□□□ 0.41
VSX2P58304 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VSX2P58304 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VSX2P58304 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VSX2P58304 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
VSX2P58304 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VSX2P58304 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VSX2P58304 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
VSX2P58304 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VSX2P58304 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VSX2P58304 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VSX2P58304 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
VSX2P58304 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VSX2P58304 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VSX2P58304 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VSX2P58304 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VSX2P58304 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.61■□□□□ 0.41
VSX2P58304 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.61■□□□□ 0.41
VSX2P58304 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.61■□□□□ 0.41
VSX2P58304 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.61■□□□□ 0.41
VSX2P58304 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.61■□□□□ 0.41
VSX2P58304 AC009065.1-201ENST00000564055 1225 ntBASIC17.61■□□□□ 0.41
VSX2P58304 AL136038.4-201ENST00000603606 1261 ntBASIC17.61■□□□□ 0.41
VSX2P58304 AL358472.4-201ENST00000633140 710 ntBASIC17.61■□□□□ 0.41
VSX2P58304 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VSX2P58304 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VSX2P58304 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VSX2P58304 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.61■□□□□ 0.41
VSX2P58304 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VSX2P58304 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VSX2P58304 AL163051.1-201ENST00000569214 1512 ntBASIC17.61■□□□□ 0.41
VSX2P58304 MYLKP1-201ENST00000509077 1580 ntBASIC17.61■□□□□ 0.41
VSX2P58304 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VSX2P58304 AL031598.1-201ENST00000561511 1773 ntBASIC17.61■□□□□ 0.41
VSX2P58304 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VSX2P58304 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VSX2P58304 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.6■□□□□ 0.41
VSX2P58304 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VSX2P58304 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
VSX2P58304 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.6■□□□□ 0.41
VSX2P58304 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
VSX2P58304 VENTXP5-201ENST00000523979 775 ntBASIC17.6■□□□□ 0.41
VSX2P58304 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.6■□□□□ 0.41
VSX2P58304 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.6■□□□□ 0.41
VSX2P58304 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.6■□□□□ 0.41
VSX2P58304 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 AL391807.1-203ENST00000604392 2365 ntBASIC17.6■□□□□ 0.41
VSX2P58304 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
VSX2P58304 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.6■□□□□ 0.41
VSX2P58304 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
VSX2P58304 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VSX2P58304 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.6■□□□□ 0.41
VSX2P58304 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
VSX2P58304 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
VSX2P58304 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.59■□□□□ 0.41
VSX2P58304 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
VSX2P58304 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.59■□□□□ 0.41
VSX2P58304 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.59■□□□□ 0.41
VSX2P58304 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms