Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.15■□□□□ 0.34
PSMD4P55036 INGX-201ENST00000359239 846 ntBASIC17.15■□□□□ 0.34
PSMD4P55036 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PSMD4P55036 ATP5G1P1-201ENST00000448724 379 ntBASIC17.15■□□□□ 0.34
PSMD4P55036 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.15■□□□□ 0.34
PSMD4P55036 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.15■□□□□ 0.34
PSMD4P55036 NEK4P2-201ENST00000580004 1012 ntBASIC17.15■□□□□ 0.34
PSMD4P55036 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.15■□□□□ 0.34
PSMD4P55036 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PSMD4P55036 LINC01023-201ENST00000606054 436 ntBASIC17.15■□□□□ 0.34
PSMD4P55036 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PSMD4P55036 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PSMD4P55036 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PSMD4P55036 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PSMD4P55036 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PSMD4P55036 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.15■□□□□ 0.34
PSMD4P55036 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.15■□□□□ 0.34
PSMD4P55036 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PSMD4P55036 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PSMD4P55036 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PSMD4P55036 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PSMD4P55036 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PSMD4P55036 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
PSMD4P55036 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PSMD4P55036 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.15■□□□□ 0.34
PSMD4P55036 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.15■□□□□ 0.34
PSMD4P55036 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PSMD4P55036 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PSMD4P55036 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PSMD4P55036 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PSMD4P55036 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PSMD4P55036 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
PSMD4P55036 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PSMD4P55036 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
PSMD4P55036 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PSMD4P55036 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.14■□□□□ 0.33
PSMD4P55036 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PSMD4P55036 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 KRT18P23-201ENST00000435622 1283 ntBASIC17.14■□□□□ 0.33
PSMD4P55036 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.14■□□□□ 0.33
PSMD4P55036 SLC25A3P1-201ENST00000443844 931 ntBASIC17.14■□□□□ 0.33
PSMD4P55036 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.14■□□□□ 0.33
PSMD4P55036 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PSMD4P55036 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PSMD4P55036 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.14■□□□□ 0.33
PSMD4P55036 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.14■□□□□ 0.33
PSMD4P55036 AC005363.2-201ENST00000618631 242 ntBASIC17.14■□□□□ 0.33
PSMD4P55036 AC097493.4-201ENST00000641197 219 ntBASIC17.14■□□□□ 0.33
PSMD4P55036 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
PSMD4P55036 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.14■□□□□ 0.33
PSMD4P55036 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
PSMD4P55036 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.14■□□□□ 0.33
PSMD4P55036 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PSMD4P55036 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.13■□□□□ 0.33
PSMD4P55036 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PSMD4P55036 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.13■□□□□ 0.33
PSMD4P55036 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.13■□□□□ 0.33
PSMD4P55036 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.13■□□□□ 0.33
PSMD4P55036 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PSMD4P55036 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.13■□□□□ 0.33
PSMD4P55036 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.13■□□□□ 0.33
PSMD4P55036 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.13■□□□□ 0.33
PSMD4P55036 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.13■□□□□ 0.33
PSMD4P55036 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.13■□□□□ 0.33
PSMD4P55036 AC112497.1-201ENST00000624824 639 ntBASIC17.13■□□□□ 0.33
PSMD4P55036 MYLKP1-201ENST00000509077 1580 ntBASIC17.13■□□□□ 0.33
PSMD4P55036 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms