Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 MYLKP1-201ENST00000509077 1580 ntBASIC17.71■□□□□ 0.43
EPHA4P54764 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.71■□□□□ 0.43
EPHA4P54764 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
EPHA4P54764 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.71■□□□□ 0.43
EPHA4P54764 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHA4P54764 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.71■□□□□ 0.43
EPHA4P54764 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHA4P54764 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
EPHA4P54764 IGHV3-41-201ENST00000613121 348 ntBASIC17.71■□□□□ 0.43
EPHA4P54764 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.71■□□□□ 0.43
EPHA4P54764 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.71■□□□□ 0.43
EPHA4P54764 AC012313.10-201ENST00000623509 926 ntBASIC17.71■□□□□ 0.43
EPHA4P54764 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 AC098818.2-201ENST00000564925 2320 ntBASIC17.71■□□□□ 0.43
EPHA4P54764 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
EPHA4P54764 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
EPHA4P54764 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA4P54764 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
EPHA4P54764 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA4P54764 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA4P54764 LETM1P2-201ENST00000597330 2178 ntBASIC17.7■□□□□ 0.42
EPHA4P54764 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
EPHA4P54764 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA4P54764 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA4P54764 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA4P54764 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.7■□□□□ 0.42
EPHA4P54764 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.7■□□□□ 0.42
EPHA4P54764 LINC00265-3P-201ENST00000447588 903 ntBASIC17.7■□□□□ 0.42
EPHA4P54764 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.7■□□□□ 0.42
EPHA4P54764 AC012615.1-201ENST00000565797 1299 ntBASIC17.7■□□□□ 0.42
EPHA4P54764 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
EPHA4P54764 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.7■□□□□ 0.42
EPHA4P54764 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.7■□□□□ 0.42
EPHA4P54764 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.7■□□□□ 0.42
EPHA4P54764 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA4P54764 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA4P54764 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
EPHA4P54764 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA4P54764 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
EPHA4P54764 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA4P54764 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.7■□□□□ 0.42
EPHA4P54764 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA4P54764 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA4P54764 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA4P54764 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA4P54764 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.7■□□□□ 0.42
EPHA4P54764 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
EPHA4P54764 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.69■□□□□ 0.42
EPHA4P54764 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 AL353692.3-201ENST00000407031 1396 ntBASIC17.69■□□□□ 0.42
EPHA4P54764 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
EPHA4P54764 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
EPHA4P54764 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.69■□□□□ 0.42
EPHA4P54764 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
EPHA4P54764 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.69■□□□□ 0.42
EPHA4P54764 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.69■□□□□ 0.42
EPHA4P54764 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.69■□□□□ 0.42
EPHA4P54764 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.69■□□□□ 0.42
EPHA4P54764 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 TPM4P1-201ENST00000436100 807 ntBASIC17.69■□□□□ 0.42
EPHA4P54764 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
EPHA4P54764 TOB2P1-201ENST00000469761 992 ntBASIC17.69■□□□□ 0.42
EPHA4P54764 AC113404.2-201ENST00000507884 177 ntBASIC17.69■□□□□ 0.42
EPHA4P54764 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.69■□□□□ 0.42
EPHA4P54764 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
EPHA4P54764 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
EPHA4P54764 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms