Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LBX1P52954 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.73■□□□□ 0.91
LBX1P52954 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LBX1P52954 AC023141.5-201ENST00000458585 616 ntBASIC20.73■□□□□ 0.91
LBX1P52954 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.73■□□□□ 0.91
LBX1P52954 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.73■□□□□ 0.91
LBX1P52954 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LBX1P52954 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.73■□□□□ 0.91
LBX1P52954 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.73■□□□□ 0.91
LBX1P52954 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.73■□□□□ 0.91
LBX1P52954 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LBX1P52954 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
LBX1P52954 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LBX1P52954 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LBX1P52954 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.72■□□□□ 0.91
LBX1P52954 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LBX1P52954 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.72■□□□□ 0.91
LBX1P52954 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LBX1P52954 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LBX1P52954 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LBX1P52954 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LBX1P52954 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.72■□□□□ 0.91
LBX1P52954 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.72■□□□□ 0.91
LBX1P52954 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.72■□□□□ 0.91
LBX1P52954 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.72■□□□□ 0.91
LBX1P52954 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.72■□□□□ 0.91
LBX1P52954 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.72■□□□□ 0.91
LBX1P52954 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.72■□□□□ 0.91
LBX1P52954 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.72■□□□□ 0.91
LBX1P52954 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LBX1P52954 UGT1A2P-201ENST00000454886 866 ntBASIC20.72■□□□□ 0.91
LBX1P52954 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LBX1P52954 AC108073.2-201ENST00000464002 357 ntBASIC20.72■□□□□ 0.91
LBX1P52954 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LBX1P52954 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.72■□□□□ 0.91
LBX1P52954 AC004877.2-201ENST00000623941 599 ntBASIC20.72■□□□□ 0.91
LBX1P52954 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LBX1P52954 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LBX1P52954 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LBX1P52954 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
LBX1P52954 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LBX1P52954 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LBX1P52954 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LBX1P52954 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LBX1P52954 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LBX1P52954 AL691432.2-201ENST00000607222 2038 ntBASIC20.71■□□□□ 0.91
LBX1P52954 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LBX1P52954 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.71■□□□□ 0.91
LBX1P52954 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LBX1P52954 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LBX1P52954 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LBX1P52954 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LBX1P52954 AF106564.1-201ENST00000607058 2553 ntBASIC20.71■□□□□ 0.91
LBX1P52954 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LBX1P52954 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LBX1P52954 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.71■□□□□ 0.91
LBX1P52954 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
LBX1P52954 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LBX1P52954 ATP5G2P4-201ENST00000442175 420 ntBASIC20.71■□□□□ 0.91
LBX1P52954 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.71■□□□□ 0.91
LBX1P52954 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LBX1P52954 AC067863.1-201ENST00000494933 530 ntBASIC20.71■□□□□ 0.91
LBX1P52954 AC113404.2-201ENST00000507884 177 ntBASIC20.71■□□□□ 0.91
LBX1P52954 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.71■□□□□ 0.91
LBX1P52954 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LBX1P52954 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.71■□□□□ 0.91
LBX1P52954 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LBX1P52954 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
LBX1P52954 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LBX1P52954 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LBX1P52954 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LBX1P52954 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LBX1P52954 AC079776.2-201ENST00000641154 1609 ntBASIC20.71■□□□□ 0.91
LBX1P52954 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LBX1P52954 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
LBX1P52954 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
LBX1P52954 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LBX1P52954 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LBX1P52954 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.7■□□□□ 0.9
LBX1P52954 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LBX1P52954 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LBX1P52954 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LBX1P52954 AL357033.4-201ENST00000617703 1807 ntBASIC20.7■□□□□ 0.9
LBX1P52954 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LBX1P52954 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LBX1P52954 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LBX1P52954 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.7■□□□□ 0.9
LBX1P52954 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.7■□□□□ 0.9
LBX1P52954 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.7■□□□□ 0.9
LBX1P52954 LINC02560-201ENST00000596379 459 ntBASIC20.7■□□□□ 0.9
LBX1P52954 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LBX1P52954 AC004817.3-201ENST00000602957 2129 ntBASIC20.7■□□□□ 0.9
LBX1P52954 AC073592.5-201ENST00000624854 528 ntBASIC20.7■□□□□ 0.9
LBX1P52954 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LBX1P52954 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
LBX1P52954 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LBX1P52954 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LBX1P52954 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LBX1P52954 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LBX1P52954 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms