Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK7P50613 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDK7P50613 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CDK7P50613 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CDK7P50613 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.31■□□□□ 0.84
CDK7P50613 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.31■□□□□ 0.84
CDK7P50613 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.31■□□□□ 0.84
CDK7P50613 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDK7P50613 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.31■□□□□ 0.84
CDK7P50613 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDK7P50613 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.31■□□□□ 0.84
CDK7P50613 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CDK7P50613 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.31■□□□□ 0.84
CDK7P50613 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.31■□□□□ 0.84
CDK7P50613 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CDK7P50613 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDK7P50613 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.31■□□□□ 0.84
CDK7P50613 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.31■□□□□ 0.84
CDK7P50613 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK7P50613 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.31■□□□□ 0.84
CDK7P50613 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDK7P50613 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.31■□□□□ 0.84
CDK7P50613 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.31■□□□□ 0.84
CDK7P50613 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDK7P50613 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK7P50613 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.3■□□□□ 0.84
CDK7P50613 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.3■□□□□ 0.84
CDK7P50613 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.3■□□□□ 0.84
CDK7P50613 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.3■□□□□ 0.84
CDK7P50613 FP475955.4-201ENST00000623131 1990 ntBASIC20.3■□□□□ 0.84
CDK7P50613 PCDHAC2-203ENST00000615316 3011 ntBASIC20.3■□□□□ 0.84
CDK7P50613 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK7P50613 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDK7P50613 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK7P50613 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CDK7P50613 RCN1P2-201ENST00000398357 915 ntBASIC20.3■□□□□ 0.84
CDK7P50613 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDK7P50613 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDK7P50613 AC096582.2-201ENST00000510860 516 ntBASIC20.3■□□□□ 0.84
CDK7P50613 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.3■□□□□ 0.84
CDK7P50613 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.3■□□□□ 0.84
CDK7P50613 FAM215A-202ENST00000632077 792 ntBASIC20.3■□□□□ 0.84
CDK7P50613 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.3■□□□□ 0.84
CDK7P50613 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK7P50613 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK7P50613 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CDK7P50613 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
CDK7P50613 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK7P50613 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK7P50613 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDK7P50613 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK7P50613 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK7P50613 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK7P50613 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK7P50613 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK7P50613 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK7P50613 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK7P50613 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK7P50613 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK7P50613 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.29■□□□□ 0.84
CDK7P50613 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK7P50613 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.29■□□□□ 0.84
CDK7P50613 MIR1233-2-201ENST00000408138 82 ntBASIC20.29■□□□□ 0.84
CDK7P50613 MIR1233-1-201ENST00000408722 82 ntBASIC20.29■□□□□ 0.84
CDK7P50613 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK7P50613 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.29■□□□□ 0.84
CDK7P50613 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.29■□□□□ 0.84
CDK7P50613 HNRNPDP1-201ENST00000439535 754 ntBASIC20.29■□□□□ 0.84
CDK7P50613 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK7P50613 FGFR3P6-201ENST00000457012 610 ntBASIC20.29■□□□□ 0.84
CDK7P50613 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.29■□□□□ 0.84
CDK7P50613 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK7P50613 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.29■□□□□ 0.84
CDK7P50613 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK7P50613 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDK7P50613 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.29■□□□□ 0.84
CDK7P50613 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.29■□□□□ 0.84
CDK7P50613 TERC-201ENST00000602385 541 ntBASIC20.29■□□□□ 0.84
CDK7P50613 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CDK7P50613 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDK7P50613 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK7P50613 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK7P50613 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK7P50613 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK7P50613 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK7P50613 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.28■□□□□ 0.84
CDK7P50613 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.28■□□□□ 0.84
CDK7P50613 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK7P50613 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK7P50613 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDK7P50613 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK7P50613 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDK7P50613 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK7P50613 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK7P50613 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDK7P50613 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.28■□□□□ 0.84
CDK7P50613 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK7P50613 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDK7P50613 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK7P50613 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms