Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LHX1P48742 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.47■□□□□ 0.71
LHX1P48742 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
LHX1P48742 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LHX1P48742 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.47■□□□□ 0.71
LHX1P48742 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LHX1P48742 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LHX1P48742 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
LHX1P48742 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LHX1P48742 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.46■□□□□ 0.71
LHX1P48742 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LHX1P48742 AL024508.2-201ENST00000607749 1894 ntBASIC19.46■□□□□ 0.71
LHX1P48742 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LHX1P48742 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LHX1P48742 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LHX1P48742 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
LHX1P48742 CHCHD2P8-201ENST00000429873 447 ntBASIC19.46■□□□□ 0.71
LHX1P48742 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.46■□□□□ 0.71
LHX1P48742 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.46■□□□□ 0.71
LHX1P48742 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.46■□□□□ 0.71
LHX1P48742 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.46■□□□□ 0.71
LHX1P48742 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
LHX1P48742 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LHX1P48742 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LHX1P48742 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.46■□□□□ 0.71
LHX1P48742 AC098818.2-201ENST00000564925 2320 ntBASIC19.46■□□□□ 0.71
LHX1P48742 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LHX1P48742 AC099343.3-201ENST00000605834 2503 ntBASIC19.46■□□□□ 0.71
LHX1P48742 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.46■□□□□ 0.71
LHX1P48742 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LHX1P48742 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
LHX1P48742 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LHX1P48742 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LHX1P48742 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LHX1P48742 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LHX1P48742 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.45■□□□□ 0.7
LHX1P48742 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LHX1P48742 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
LHX1P48742 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LHX1P48742 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LHX1P48742 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LHX1P48742 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LHX1P48742 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.45■□□□□ 0.7
LHX1P48742 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.45■□□□□ 0.7
LHX1P48742 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
LHX1P48742 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.45■□□□□ 0.7
LHX1P48742 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.45■□□□□ 0.7
LHX1P48742 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LHX1P48742 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.45■□□□□ 0.7
LHX1P48742 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LHX1P48742 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LHX1P48742 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.45■□□□□ 0.7
LHX1P48742 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LHX1P48742 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.45■□□□□ 0.7
LHX1P48742 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LHX1P48742 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.45■□□□□ 0.7
LHX1P48742 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LHX1P48742 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX1P48742 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
LHX1P48742 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.44■□□□□ 0.7
LHX1P48742 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LHX1P48742 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
LHX1P48742 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX1P48742 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LHX1P48742 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.44■□□□□ 0.7
LHX1P48742 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LHX1P48742 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LHX1P48742 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX1P48742 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX1P48742 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.44■□□□□ 0.7
LHX1P48742 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LHX1P48742 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX1P48742 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LHX1P48742 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LHX1P48742 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.44■□□□□ 0.7
LHX1P48742 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.44■□□□□ 0.7
LHX1P48742 AC126763.1-201ENST00000552015 2118 ntBASIC19.44■□□□□ 0.7
LHX1P48742 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
LHX1P48742 AC090616.6-201ENST00000582640 721 ntBASIC19.44■□□□□ 0.7
LHX1P48742 NPAP1P7-201ENST00000613027 823 ntBASIC19.44■□□□□ 0.7
LHX1P48742 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.44■□□□□ 0.7
LHX1P48742 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LHX1P48742 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX1P48742 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX1P48742 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LHX1P48742 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX1P48742 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LHX1P48742 AC073592.3-201ENST00000625118 1834 ntBASIC19.44■□□□□ 0.7
LHX1P48742 AL353692.3-201ENST00000407031 1396 ntBASIC19.44■□□□□ 0.7
LHX1P48742 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX1P48742 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LHX1P48742 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX1P48742 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.43■□□□□ 0.7
LHX1P48742 AC005082.1-201ENST00000413042 2259 ntBASIC19.43■□□□□ 0.7
LHX1P48742 TNXA-203ENST00000507684 2038 ntBASIC19.43■□□□□ 0.7
LHX1P48742 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX1P48742 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX1P48742 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LHX1P48742 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.43■□□□□ 0.7
LHX1P48742 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms