Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC1A1P43005 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC1A1P43005 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A1P43005 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC1A1P43005 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC1A1P43005 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A1P43005 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A1P43005 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A1P43005 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SLC1A1P43005 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC1A1P43005 RBM17P1-201ENST00000453646 1190 ntBASIC19.28■□□□□ 0.68
SLC1A1P43005 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SLC1A1P43005 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC1A1P43005 AP003041.3-201ENST00000527151 707 ntBASIC19.28■□□□□ 0.68
SLC1A1P43005 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC1A1P43005 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A1P43005 PHGDH-209ENST00000641074 1780 ntBASIC19.28■□□□□ 0.68
SLC1A1P43005 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.28■□□□□ 0.68
SLC1A1P43005 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A1P43005 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC1A1P43005 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A1P43005 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A1P43005 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A1P43005 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A1P43005 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SLC1A1P43005 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A1P43005 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
SLC1A1P43005 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A1P43005 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC1A1P43005 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC1A1P43005 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SLC1A1P43005 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A1P43005 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A1P43005 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A1P43005 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC1A1P43005 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A1P43005 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A1P43005 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC1A1P43005 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC1A1P43005 CCR12P-201ENST00000446203 998 ntBASIC19.27■□□□□ 0.68
SLC1A1P43005 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.27■□□□□ 0.68
SLC1A1P43005 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.27■□□□□ 0.68
SLC1A1P43005 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC1A1P43005 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC1A1P43005 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC1A1P43005 MIR4785-201ENST00000585005 73 ntBASIC19.27■□□□□ 0.68
SLC1A1P43005 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC1A1P43005 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A1P43005 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SLC1A1P43005 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A1P43005 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SLC1A1P43005 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC1A1P43005 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A1P43005 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SLC1A1P43005 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SLC1A1P43005 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.27■□□□□ 0.67
SLC1A1P43005 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SLC1A1P43005 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC1A1P43005 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SLC1A1P43005 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A1P43005 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A1P43005 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC1A1P43005 AC090340.1-201ENST00000620778 4980 ntBASIC19.26■□□□□ 0.67
SLC1A1P43005 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
SLC1A1P43005 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A1P43005 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC1A1P43005 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SLC1A1P43005 KRT18P23-201ENST00000435622 1283 ntBASIC19.26■□□□□ 0.67
SLC1A1P43005 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A1P43005 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.26■□□□□ 0.67
SLC1A1P43005 FITM1-202ENST00000559294 800 ntBASIC19.26■□□□□ 0.67
SLC1A1P43005 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.26■□□□□ 0.67
SLC1A1P43005 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC1A1P43005 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC1A1P43005 CR769767.2-201ENST00000622735 460 ntBASIC19.26■□□□□ 0.67
SLC1A1P43005 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A1P43005 AC067852.2-201ENST00000590513 2313 ntBASIC19.26■□□□□ 0.67
SLC1A1P43005 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A1P43005 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A1P43005 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC1A1P43005 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A1P43005 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A1P43005 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A1P43005 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SLC1A1P43005 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SLC1A1P43005 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A1P43005 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A1P43005 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 AC092338.2-201ENST00000568827 1415 ntBASIC19.25■□□□□ 0.67
SLC1A1P43005 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC1A1P43005 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC1A1P43005 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SLC1A1P43005 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLC1A1P43005 GNAS-203ENST00000306120 1878 ntBASIC19.25■□□□□ 0.67
SLC1A1P43005 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms