Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CEACAM3P40198 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.04■□□□□ -0
CEACAM3P40198 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CEACAM3P40198 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CEACAM3P40198 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CEACAM3P40198 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CEACAM3P40198 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CEACAM3P40198 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CEACAM3P40198 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CEACAM3P40198 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.03■□□□□ -0
CEACAM3P40198 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.03■□□□□ -0
CEACAM3P40198 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CEACAM3P40198 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CEACAM3P40198 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.03■□□□□ -0
CEACAM3P40198 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CEACAM3P40198 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.03■□□□□ -0
CEACAM3P40198 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CEACAM3P40198 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.03■□□□□ -0
CEACAM3P40198 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
CEACAM3P40198 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CEACAM3P40198 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CEACAM3P40198 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.03■□□□□ -0
CEACAM3P40198 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CEACAM3P40198 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.03■□□□□ -0
CEACAM3P40198 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CEACAM3P40198 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.03■□□□□ -0
CEACAM3P40198 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.03■□□□□ -0
CEACAM3P40198 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.03■□□□□ -0
CEACAM3P40198 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.03■□□□□ -0
CEACAM3P40198 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.03■□□□□ -0
CEACAM3P40198 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CEACAM3P40198 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CEACAM3P40198 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.03■□□□□ -0
CEACAM3P40198 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.03■□□□□ -0
CEACAM3P40198 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.03■□□□□ -0
CEACAM3P40198 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CEACAM3P40198 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.02■□□□□ -0
CEACAM3P40198 MYLKP1-201ENST00000509077 1580 ntBASIC15.02■□□□□ -0
CEACAM3P40198 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.02■□□□□ -0
CEACAM3P40198 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CEACAM3P40198 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CEACAM3P40198 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CEACAM3P40198 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CEACAM3P40198 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CEACAM3P40198 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CEACAM3P40198 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CEACAM3P40198 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CEACAM3P40198 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.02■□□□□ -0
CEACAM3P40198 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CEACAM3P40198 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.02■□□□□ -0
CEACAM3P40198 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.02■□□□□ -0
CEACAM3P40198 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CEACAM3P40198 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.02■□□□□ -0
CEACAM3P40198 AC104390.1-201ENST00000555663 520 ntBASIC15.02■□□□□ -0
CEACAM3P40198 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.02■□□□□ -0
CEACAM3P40198 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.02■□□□□ -0
CEACAM3P40198 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.02■□□□□ -0
CEACAM3P40198 LINC01238-205ENST00000567549 1107 ntBASIC15.02■□□□□ -0
CEACAM3P40198 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.02■□□□□ -0
CEACAM3P40198 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.02□□□□□ -0.01
CEACAM3P40198 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.02□□□□□ -0.01
CEACAM3P40198 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CEACAM3P40198 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CEACAM3P40198 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CEACAM3P40198 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CEACAM3P40198 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.02□□□□□ -0.01
CEACAM3P40198 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CEACAM3P40198 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CEACAM3P40198 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CEACAM3P40198 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CEACAM3P40198 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CEACAM3P40198 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CEACAM3P40198 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.01□□□□□ -0.01
CEACAM3P40198 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CEACAM3P40198 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CEACAM3P40198 AC020916.1-201ENST00000587762 1774 ntBASIC15.01□□□□□ -0.01
CEACAM3P40198 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CEACAM3P40198 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CEACAM3P40198 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CEACAM3P40198 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CEACAM3P40198 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CEACAM3P40198 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CEACAM3P40198 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CEACAM3P40198 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CEACAM3P40198 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CEACAM3P40198 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CEACAM3P40198 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.01□□□□□ -0.01
CEACAM3P40198 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.01□□□□□ -0.01
CEACAM3P40198 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.01□□□□□ -0.01
CEACAM3P40198 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.01□□□□□ -0.01
CEACAM3P40198 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CEACAM3P40198 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
CEACAM3P40198 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CEACAM3P40198 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.01□□□□□ -0.01
CEACAM3P40198 AC024243.1-201ENST00000609234 778 ntBASIC15.01□□□□□ -0.01
CEACAM3P40198 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CEACAM3P40198 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CEACAM3P40198 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CEACAM3P40198 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CEACAM3P40198 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms