Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC034105.1-201ENST00000563488 319 ntBASIC23.08■■□□□ 1.29
RFC4P35249 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC23.08■■□□□ 1.29
RFC4P35249 AL138831.2-201ENST00000606564 490 ntBASIC23.08■■□□□ 1.29
RFC4P35249 AL139424.1-201ENST00000607572 797 ntBASIC23.08■■□□□ 1.29
RFC4P35249 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC23.08■■□□□ 1.29
RFC4P35249 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RFC4P35249 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RFC4P35249 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RFC4P35249 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RFC4P35249 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RFC4P35249 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RFC4P35249 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RFC4P35249 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.08■■□□□ 1.29
RFC4P35249 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RFC4P35249 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.08■■□□□ 1.28
RFC4P35249 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RFC4P35249 ASL-204ENST00000395331 1538 ntTSL 5 BASIC23.08■■□□□ 1.28
RFC4P35249 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RFC4P35249 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFC4P35249 NARF-204ENST00000390006 1766 ntTSL 2 BASIC23.07■■□□□ 1.28
RFC4P35249 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.07■■□□□ 1.28
RFC4P35249 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFC4P35249 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC23.07■■□□□ 1.28
RFC4P35249 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.07■■□□□ 1.28
RFC4P35249 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFC4P35249 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFC4P35249 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC23.07■■□□□ 1.28
RFC4P35249 LBH-204ENST00000406087 559 ntTSL 4 BASIC23.07■■□□□ 1.28
RFC4P35249 AC098831.1-202ENST00000438821 336 ntBASIC23.07■■□□□ 1.28
RFC4P35249 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC23.07■■□□□ 1.28
RFC4P35249 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC23.07■■□□□ 1.28
RFC4P35249 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC23.07■■□□□ 1.28
RFC4P35249 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
RFC4P35249 AC010327.4-202ENST00000591484 748 ntBASIC23.07■■□□□ 1.28
RFC4P35249 AC011467.2-201ENST00000598425 242 ntBASIC23.07■■□□□ 1.28
RFC4P35249 HOTTIP_1.1-201ENST00000620415 57 ntBASIC23.07■■□□□ 1.28
RFC4P35249 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFC4P35249 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
RFC4P35249 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RFC4P35249 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
RFC4P35249 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFC4P35249 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
RFC4P35249 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFC4P35249 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFC4P35249 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFC4P35249 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC23.06■■□□□ 1.28
RFC4P35249 AC009102.3-201ENST00000623118 1491 ntBASIC23.06■■□□□ 1.28
RFC4P35249 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFC4P35249 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFC4P35249 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFC4P35249 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFC4P35249 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC23.06■■□□□ 1.28
RFC4P35249 ABCD1P5-201ENST00000445663 754 ntBASIC23.06■■□□□ 1.28
RFC4P35249 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC23.06■■□□□ 1.28
RFC4P35249 NMU-202ENST00000505262 693 ntTSL 3 BASIC23.06■■□□□ 1.28
RFC4P35249 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC23.06■■□□□ 1.28
RFC4P35249 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC23.06■■□□□ 1.28
RFC4P35249 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC23.06■■□□□ 1.28
RFC4P35249 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFC4P35249 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFC4P35249 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
RFC4P35249 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFC4P35249 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFC4P35249 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RFC4P35249 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RFC4P35249 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RFC4P35249 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFC4P35249 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC23.05■■□□□ 1.28
RFC4P35249 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.05■■□□□ 1.28
RFC4P35249 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.05■■□□□ 1.28
RFC4P35249 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFC4P35249 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFC4P35249 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFC4P35249 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFC4P35249 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFC4P35249 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RFC4P35249 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RFC4P35249 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFC4P35249 RPSAP43-201ENST00000402237 625 ntBASIC23.05■■□□□ 1.28
RFC4P35249 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC23.05■■□□□ 1.28
RFC4P35249 HMGN1P19-201ENST00000436976 333 ntBASIC23.05■■□□□ 1.28
RFC4P35249 MTCL1P1-201ENST00000446207 792 ntBASIC23.05■■□□□ 1.28
RFC4P35249 OR7E14P-202ENST00000530490 1290 ntBASIC23.05■■□□□ 1.28
RFC4P35249 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RFC4P35249 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC23.05■■□□□ 1.28
RFC4P35249 AC012640.2-201ENST00000561606 901 ntBASIC23.05■■□□□ 1.28
RFC4P35249 PNMT-203ENST00000581428 677 ntTSL 2 BASIC23.05■■□□□ 1.28
RFC4P35249 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC23.05■■□□□ 1.28
RFC4P35249 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.05■■□□□ 1.28
RFC4P35249 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFC4P35249 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
RFC4P35249 UROS-202ENST00000368778 1556 ntTSL 2 BASIC23.05■■□□□ 1.28
RFC4P35249 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RFC4P35249 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC23.05■■□□□ 1.28
RFC4P35249 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFC4P35249 AC099343.3-201ENST00000605834 2503 ntBASIC23.05■■□□□ 1.28
RFC4P35249 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFC4P35249 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFC4P35249 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.04■■□□□ 1.28
RFC4P35249 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms