Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPA3P35244 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPA3P35244 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
RPA3P35244 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.63■□□□□ 0.57
RPA3P35244 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPA3P35244 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPA3P35244 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RPA3P35244 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RPA3P35244 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPA3P35244 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPA3P35244 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.63■□□□□ 0.57
RPA3P35244 AC004980.1-204ENST00000429707 299 ntBASIC18.63■□□□□ 0.57
RPA3P35244 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.63■□□□□ 0.57
RPA3P35244 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.63■□□□□ 0.57
RPA3P35244 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.63■□□□□ 0.57
RPA3P35244 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPA3P35244 AC093827.2-201ENST00000512654 315 ntBASIC18.63■□□□□ 0.57
RPA3P35244 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.63■□□□□ 0.57
RPA3P35244 REXO1L9P-201ENST00000604264 2108 ntBASIC18.63■□□□□ 0.57
RPA3P35244 AC066615.1-201ENST00000640911 628 ntBASIC18.63■□□□□ 0.57
RPA3P35244 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RPA3P35244 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPA3P35244 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.63■□□□□ 0.57
RPA3P35244 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.63■□□□□ 0.57
RPA3P35244 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPA3P35244 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPA3P35244 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.63■□□□□ 0.57
RPA3P35244 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.63■□□□□ 0.57
RPA3P35244 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPA3P35244 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RPA3P35244 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPA3P35244 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.63■□□□□ 0.57
RPA3P35244 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.62■□□□□ 0.57
RPA3P35244 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPA3P35244 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RPA3P35244 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPA3P35244 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.62■□□□□ 0.57
RPA3P35244 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RPA3P35244 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPA3P35244 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPA3P35244 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RPA3P35244 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RPA3P35244 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RPA3P35244 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RPA3P35244 SLC25A6P5-201ENST00000435663 894 ntBASIC18.62■□□□□ 0.57
RPA3P35244 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.62■□□□□ 0.57
RPA3P35244 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.62■□□□□ 0.57
RPA3P35244 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.62■□□□□ 0.57
RPA3P35244 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.62■□□□□ 0.57
RPA3P35244 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.62■□□□□ 0.57
RPA3P35244 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.62■□□□□ 0.57
RPA3P35244 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPA3P35244 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPA3P35244 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
RPA3P35244 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPA3P35244 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.62■□□□□ 0.57
RPA3P35244 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPA3P35244 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPA3P35244 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.62■□□□□ 0.57
RPA3P35244 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPA3P35244 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPA3P35244 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPA3P35244 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPA3P35244 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RPA3P35244 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.61■□□□□ 0.57
RPA3P35244 PRORSD1P-202ENST00000563365 2154 ntBASIC18.61■□□□□ 0.57
RPA3P35244 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPA3P35244 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.61■□□□□ 0.57
RPA3P35244 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPA3P35244 KRT8P32-201ENST00000512863 1461 ntBASIC18.61■□□□□ 0.57
RPA3P35244 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPA3P35244 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPA3P35244 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.61■□□□□ 0.57
RPA3P35244 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPA3P35244 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RPA3P35244 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPA3P35244 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.61■□□□□ 0.57
RPA3P35244 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.61■□□□□ 0.57
RPA3P35244 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.61■□□□□ 0.57
RPA3P35244 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.61■□□□□ 0.57
RPA3P35244 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.61■□□□□ 0.57
RPA3P35244 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.61■□□□□ 0.57
RPA3P35244 AC026271.3-201ENST00000571884 352 ntBASIC18.61■□□□□ 0.57
RPA3P35244 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.61■□□□□ 0.57
RPA3P35244 MYC-208ENST00000641036 567 ntBASIC18.61■□□□□ 0.57
RPA3P35244 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPA3P35244 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPA3P35244 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPA3P35244 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.61■□□□□ 0.57
RPA3P35244 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPA3P35244 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPA3P35244 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RPA3P35244 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
RPA3P35244 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPA3P35244 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPA3P35244 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPA3P35244 AL357033.4-201ENST00000617703 1807 ntBASIC18.6■□□□□ 0.57
RPA3P35244 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPA3P35244 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RPA3P35244 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms