Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA3P32297 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA3P32297 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.43■□□□□ 0.7
CHRNA3P32297 EGLN1P1-201ENST00000531623 762 ntBASIC19.43■□□□□ 0.7
CHRNA3P32297 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CHRNA3P32297 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA3P32297 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRNA3P32297 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
CHRNA3P32297 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CHRNA3P32297 AC005363.2-201ENST00000618631 242 ntBASIC19.43■□□□□ 0.7
CHRNA3P32297 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA3P32297 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA3P32297 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA3P32297 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA3P32297 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CHRNA3P32297 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA3P32297 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRNA3P32297 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CHRNA3P32297 AC135776.1-201ENST00000319817 2481 ntBASIC19.43■□□□□ 0.7
CHRNA3P32297 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA3P32297 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA3P32297 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA3P32297 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.42■□□□□ 0.7
CHRNA3P32297 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA3P32297 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA3P32297 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CHRNA3P32297 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.42■□□□□ 0.7
CHRNA3P32297 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA3P32297 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA3P32297 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA3P32297 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA3P32297 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA3P32297 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA3P32297 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNA3P32297 TSPY14P-201ENST00000303979 915 ntBASIC19.42■□□□□ 0.7
CHRNA3P32297 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNA3P32297 RCN1P1-201ENST00000400413 996 ntBASIC19.42■□□□□ 0.7
CHRNA3P32297 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNA3P32297 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.42■□□□□ 0.7
CHRNA3P32297 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA3P32297 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA3P32297 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA3P32297 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.42■□□□□ 0.7
CHRNA3P32297 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA3P32297 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
CHRNA3P32297 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA3P32297 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA3P32297 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNA3P32297 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNA3P32297 KRT8P3-201ENST00000519669 1449 ntBASIC19.42■□□□□ 0.7
CHRNA3P32297 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA3P32297 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA3P32297 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA3P32297 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CHRNA3P32297 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA3P32297 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CHRNA3P32297 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CHRNA3P32297 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA3P32297 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.41■□□□□ 0.7
CHRNA3P32297 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA3P32297 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CHRNA3P32297 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA3P32297 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA3P32297 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CHRNA3P32297 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA3P32297 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CHRNA3P32297 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA3P32297 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.41■□□□□ 0.7
CHRNA3P32297 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CHRNA3P32297 KRT8P45-201ENST00000414328 1447 ntBASIC19.41■□□□□ 0.7
CHRNA3P32297 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CHRNA3P32297 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA3P32297 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA3P32297 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA3P32297 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA3P32297 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA3P32297 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA3P32297 LTB4R2-202ENST00000528054 3092 ntBASIC19.4■□□□□ 0.7
CHRNA3P32297 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA3P32297 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA3P32297 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
CHRNA3P32297 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.4■□□□□ 0.7
CHRNA3P32297 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA3P32297 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA3P32297 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.4■□□□□ 0.7
CHRNA3P32297 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA3P32297 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
CHRNA3P32297 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA3P32297 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.4■□□□□ 0.7
CHRNA3P32297 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA3P32297 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CHRNA3P32297 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA3P32297 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA3P32297 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA3P32297 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA3P32297 KRT8P11-201ENST00000409686 1436 ntBASIC19.4■□□□□ 0.7
CHRNA3P32297 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA3P32297 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA3P32297 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CHRNA3P32297 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms