Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
HOXA11P31270 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXA11P31270 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA11P31270 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA11P31270 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA11P31270 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA11P31270 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXA11P31270 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.86■□□□□ 0.77
HOXA11P31270 AC104819.1-201ENST00000504587 486 ntBASIC19.86■□□□□ 0.77
HOXA11P31270 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HOXA11P31270 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA11P31270 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXA11P31270 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.86■□□□□ 0.77
HOXA11P31270 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXA11P31270 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA11P31270 Z69720.1-201ENST00000601483 472 ntBASIC19.86■□□□□ 0.77
HOXA11P31270 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA11P31270 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA11P31270 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA11P31270 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA11P31270 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA11P31270 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA11P31270 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXA11P31270 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA11P31270 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA11P31270 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA11P31270 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA11P31270 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA11P31270 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXA11P31270 AC026396.1-201ENST00000419388 421 ntBASIC19.85■□□□□ 0.77
HOXA11P31270 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.85■□□□□ 0.77
HOXA11P31270 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXA11P31270 AC246785.2-201ENST00000432512 513 ntBASIC19.85■□□□□ 0.77
HOXA11P31270 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA11P31270 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HOXA11P31270 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.85■□□□□ 0.77
HOXA11P31270 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
HOXA11P31270 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA11P31270 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA11P31270 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA11P31270 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA11P31270 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA11P31270 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA11P31270 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA11P31270 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA11P31270 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA11P31270 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA11P31270 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA11P31270 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
HOXA11P31270 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HOXA11P31270 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA11P31270 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA11P31270 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA11P31270 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.84■□□□□ 0.77
HOXA11P31270 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXA11P31270 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.84■□□□□ 0.77
HOXA11P31270 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.84■□□□□ 0.77
HOXA11P31270 KRT18P31-201ENST00000506277 1292 ntBASIC19.84■□□□□ 0.77
HOXA11P31270 AC111152.3-201ENST00000569699 673 ntBASIC19.84■□□□□ 0.77
HOXA11P31270 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXA11P31270 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA11P31270 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA11P31270 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA11P31270 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA11P31270 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HOXA11P31270 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA11P31270 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXA11P31270 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.83■□□□□ 0.77
HOXA11P31270 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HOXA11P31270 NSUN5P1-202ENST00000421140 1535 ntBASIC19.83■□□□□ 0.77
HOXA11P31270 NSUN5P2-203ENST00000457352 1529 ntBASIC19.83■□□□□ 0.77
HOXA11P31270 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXA11P31270 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HOXA11P31270 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
HOXA11P31270 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXA11P31270 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
HOXA11P31270 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXA11P31270 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.83■□□□□ 0.77
HOXA11P31270 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HOXA11P31270 AC068472.1-201ENST00000474589 881 ntBASIC19.83■□□□□ 0.77
HOXA11P31270 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.83■□□□□ 0.77
HOXA11P31270 AC126763.1-201ENST00000552015 2118 ntBASIC19.83■□□□□ 0.77
HOXA11P31270 AC091304.2-201ENST00000564639 760 ntBASIC19.83■□□□□ 0.77
HOXA11P31270 AC011840.4-201ENST00000578471 627 ntBASIC19.83■□□□□ 0.77
HOXA11P31270 IFNL4P1-201ENST00000607083 540 ntBASIC19.83■□□□□ 0.77
HOXA11P31270 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.83■□□□□ 0.77
HOXA11P31270 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HOXA11P31270 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.83■□□□□ 0.76
HOXA11P31270 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HOXA11P31270 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXA11P31270 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.83■□□□□ 0.76
HOXA11P31270 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXA11P31270 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXA11P31270 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
HOXA11P31270 AP000974.1-201ENST00000623909 2387 ntBASIC19.83■□□□□ 0.76
HOXA11P31270 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXA11P31270 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HOXA11P31270 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA11P31270 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HOXA11P31270 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms