Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.5■□□□□ 0.39
MMP11P24347 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.5■□□□□ 0.39
MMP11P24347 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP11P24347 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP11P24347 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP11P24347 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP11P24347 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP11P24347 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.49■□□□□ 0.39
MMP11P24347 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP11P24347 KRT8P7-201ENST00000533003 1432 ntBASIC17.49■□□□□ 0.39
MMP11P24347 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP11P24347 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP11P24347 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP11P24347 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP11P24347 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.49■□□□□ 0.39
MMP11P24347 SEC1P-202ENST00000473944 940 ntBASIC17.49■□□□□ 0.39
MMP11P24347 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP11P24347 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.49■□□□□ 0.39
MMP11P24347 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.49■□□□□ 0.39
MMP11P24347 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP11P24347 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MMP11P24347 AC135050.7-201ENST00000624508 2218 ntBASIC17.49■□□□□ 0.39
MMP11P24347 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.49■□□□□ 0.39
MMP11P24347 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP11P24347 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP11P24347 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP11P24347 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.49■□□□□ 0.39
MMP11P24347 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP11P24347 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
MMP11P24347 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP11P24347 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.48■□□□□ 0.39
MMP11P24347 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP11P24347 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MMP11P24347 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
MMP11P24347 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP11P24347 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.48■□□□□ 0.39
MMP11P24347 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP11P24347 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 AC008556.1-201ENST00000610908 2040 ntBASIC17.48■□□□□ 0.39
MMP11P24347 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP11P24347 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP11P24347 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.48■□□□□ 0.39
MMP11P24347 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP11P24347 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP11P24347 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.47■□□□□ 0.39
MMP11P24347 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP11P24347 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.47■□□□□ 0.39
MMP11P24347 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MMP11P24347 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP11P24347 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP11P24347 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP11P24347 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP11P24347 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
MMP11P24347 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.47■□□□□ 0.39
MMP11P24347 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP11P24347 AC069148.1-201ENST00000608741 768 ntBASIC17.47■□□□□ 0.39
MMP11P24347 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.47■□□□□ 0.39
MMP11P24347 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
MMP11P24347 KRT8P32-201ENST00000512863 1461 ntBASIC17.47■□□□□ 0.39
MMP11P24347 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP11P24347 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP11P24347 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP11P24347 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP11P24347 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.47■□□□□ 0.39
MMP11P24347 AL390961.4-201ENST00000623958 2535 ntBASIC17.47■□□□□ 0.39
MMP11P24347 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.47■□□□□ 0.39
MMP11P24347 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP11P24347 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP11P24347 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MMP11P24347 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP11P24347 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MMP11P24347 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP11P24347 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP11P24347 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP11P24347 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP11P24347 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.46■□□□□ 0.39
MMP11P24347 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MMP11P24347 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.46■□□□□ 0.39
MMP11P24347 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.46■□□□□ 0.39
MMP11P24347 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms