Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC32.13■■■□□ 2.73
TOP2AP11388 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC32.13■■■□□ 2.73
TOP2AP11388 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
TOP2AP11388 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC32.13■■■□□ 2.73
TOP2AP11388 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC32.13■■■□□ 2.73
TOP2AP11388 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
TOP2AP11388 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
TOP2AP11388 EFS-203ENST00000429593 2610 ntTSL 2 BASIC32.13■■■□□ 2.73
TOP2AP11388 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
TOP2AP11388 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
TOP2AP11388 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC32.12■■■□□ 2.73
TOP2AP11388 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
TOP2AP11388 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
TOP2AP11388 KRT18P65-201ENST00000439811 1286 ntBASIC32.12■■■□□ 2.73
TOP2AP11388 AC093484.2-201ENST00000580996 2166 ntBASIC32.12■■■□□ 2.73
TOP2AP11388 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC32.12■■■□□ 2.73
TOP2AP11388 AC104109.2-201ENST00000602919 1418 ntBASIC32.12■■■□□ 2.73
TOP2AP11388 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
TOP2AP11388 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
TOP2AP11388 ZNF259P1-201ENST00000407656 1365 ntBASIC32.12■■■□□ 2.73
TOP2AP11388 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC32.12■■■□□ 2.73
TOP2AP11388 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
TOP2AP11388 CLDN5-201ENST00000403084 2357 ntBASIC32.11■■■□□ 2.73
TOP2AP11388 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
TOP2AP11388 AC008735.5-201ENST00000623544 497 ntBASIC32.11■■■□□ 2.73
TOP2AP11388 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
TOP2AP11388 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
TOP2AP11388 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
TOP2AP11388 LINC01126-201ENST00000623515 1646 ntBASIC32.11■■■□□ 2.73
TOP2AP11388 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC32.11■■■□□ 2.73
TOP2AP11388 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC32.11■■■□□ 2.73
TOP2AP11388 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
TOP2AP11388 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
TOP2AP11388 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC32.11■■■□□ 2.73
TOP2AP11388 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC32.11■■■□□ 2.73
TOP2AP11388 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
TOP2AP11388 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC32.11■■■□□ 2.73
TOP2AP11388 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
TOP2AP11388 FAM220CP-201ENST00000395253 831 ntBASIC32.1■■■□□ 2.73
TOP2AP11388 CTNS-203ENST00000399306 803 ntTSL 3 BASIC32.1■■■□□ 2.73
TOP2AP11388 NMU-202ENST00000505262 693 ntTSL 3 BASIC32.1■■■□□ 2.73
TOP2AP11388 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC32.1■■■□□ 2.73
TOP2AP11388 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
TOP2AP11388 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC32.1■■■□□ 2.73
TOP2AP11388 FAM197Y3-203ENST00000618346 717 ntBASIC32.1■■■□□ 2.73
TOP2AP11388 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC32.1■■■□□ 2.73
TOP2AP11388 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC32.1■■■□□ 2.73
TOP2AP11388 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC32.1■■■□□ 2.73
TOP2AP11388 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC32.1■■■□□ 2.73
TOP2AP11388 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
TOP2AP11388 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC32.1■■■□□ 2.73
TOP2AP11388 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
TOP2AP11388 RAB17-203ENST00000409576 466 ntTSL 3 BASIC32.1■■■□□ 2.73
TOP2AP11388 MED15P5-201ENST00000423150 992 ntBASIC32.1■■■□□ 2.73
TOP2AP11388 Z83851.2-201ENST00000609564 659 ntBASIC32.1■■■□□ 2.73
TOP2AP11388 ADK-206ENST00000541550 2222 ntTSL 2 BASIC32.09■■■□□ 2.73
TOP2AP11388 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC32.09■■■□□ 2.73
TOP2AP11388 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
TOP2AP11388 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC32.09■■■□□ 2.73
TOP2AP11388 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
TOP2AP11388 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
TOP2AP11388 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
TOP2AP11388 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
TOP2AP11388 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
TOP2AP11388 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
TOP2AP11388 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
TOP2AP11388 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
TOP2AP11388 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
TOP2AP11388 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
TOP2AP11388 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
TOP2AP11388 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC32.08■■■□□ 2.73
TOP2AP11388 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC32.08■■■□□ 2.73
TOP2AP11388 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC32.08■■■□□ 2.73
TOP2AP11388 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC32.08■■■□□ 2.73
TOP2AP11388 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC32.08■■■□□ 2.73
TOP2AP11388 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC32.08■■■□□ 2.73
TOP2AP11388 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.73
TOP2AP11388 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.73
TOP2AP11388 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC32.07■■■□□ 2.72
TOP2AP11388 OR7E14P-202ENST00000530490 1290 ntBASIC32.07■■■□□ 2.72
TOP2AP11388 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC32.07■■■□□ 2.72
TOP2AP11388 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC32.07■■■□□ 2.72
TOP2AP11388 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
TOP2AP11388 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
TOP2AP11388 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
TOP2AP11388 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC32.07■■■□□ 2.72
TOP2AP11388 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
TOP2AP11388 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC32.07■■■□□ 2.72
TOP2AP11388 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
TOP2AP11388 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC32.06■■■□□ 2.72
TOP2AP11388 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC32.06■■■□□ 2.72
TOP2AP11388 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC32.06■■■□□ 2.72
TOP2AP11388 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC32.06■■■□□ 2.72
TOP2AP11388 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC32.06■■■□□ 2.72
TOP2AP11388 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC32.06■■■□□ 2.72
TOP2AP11388 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC32.06■■■□□ 2.72
TOP2AP11388 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
TOP2AP11388 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
TOP2AP11388 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
TOP2AP11388 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms