Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 AC132008.2-207ENST00000454517 770 ntBASIC18.63■□□□□ 0.57
CHRNB1P11230 AC093909.1-201ENST00000504731 1122 ntBASIC18.63■□□□□ 0.57
CHRNB1P11230 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB1P11230 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRNB1P11230 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.63■□□□□ 0.57
CHRNB1P11230 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB1P11230 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.63■□□□□ 0.57
CHRNB1P11230 AC008608.2-201ENST00000606089 416 ntBASIC18.63■□□□□ 0.57
CHRNB1P11230 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB1P11230 AC114341.1-201ENST00000618070 349 ntBASIC18.63■□□□□ 0.57
CHRNB1P11230 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CHRNB1P11230 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB1P11230 AC243591.1-201ENST00000452967 1364 ntBASIC18.63■□□□□ 0.57
CHRNB1P11230 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB1P11230 KRT8P50-201ENST00000562022 1438 ntBASIC18.63■□□□□ 0.57
CHRNB1P11230 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB1P11230 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB1P11230 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB1P11230 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB1P11230 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.63■□□□□ 0.57
CHRNB1P11230 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB1P11230 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHRNB1P11230 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNB1P11230 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNB1P11230 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB1P11230 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB1P11230 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB1P11230 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB1P11230 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB1P11230 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB1P11230 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
CHRNB1P11230 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.62■□□□□ 0.57
CHRNB1P11230 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
CHRNB1P11230 AC018712.1-201ENST00000455767 687 ntBASIC18.62■□□□□ 0.57
CHRNB1P11230 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.62■□□□□ 0.57
CHRNB1P11230 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNB1P11230 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB1P11230 AC096582.2-201ENST00000510860 516 ntBASIC18.62■□□□□ 0.57
CHRNB1P11230 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.62■□□□□ 0.57
CHRNB1P11230 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.62■□□□□ 0.57
CHRNB1P11230 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CHRNB1P11230 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.62■□□□□ 0.57
CHRNB1P11230 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB1P11230 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB1P11230 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB1P11230 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB1P11230 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.62■□□□□ 0.57
CHRNB1P11230 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.62■□□□□ 0.57
CHRNB1P11230 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNB1P11230 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNB1P11230 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.62■□□□□ 0.57
CHRNB1P11230 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNB1P11230 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB1P11230 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHRNB1P11230 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRNB1P11230 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB1P11230 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB1P11230 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRNB1P11230 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB1P11230 AL357033.4-201ENST00000617703 1807 ntBASIC18.61■□□□□ 0.57
CHRNB1P11230 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB1P11230 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB1P11230 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB1P11230 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNB1P11230 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNB1P11230 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB1P11230 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CHRNB1P11230 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNB1P11230 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRNB1P11230 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRNB1P11230 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNB1P11230 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB1P11230 POLD2P1-201ENST00000511220 997 ntBASIC18.61■□□□□ 0.57
CHRNB1P11230 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB1P11230 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRNB1P11230 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRNB1P11230 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB1P11230 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB1P11230 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB1P11230 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB1P11230 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRNB1P11230 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRNB1P11230 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB1P11230 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB1P11230 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB1P11230 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CHRNB1P11230 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.6■□□□□ 0.57
CHRNB1P11230 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB1P11230 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRNB1P11230 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CHRNB1P11230 AC092865.5-201ENST00000545435 363 ntBASIC18.6■□□□□ 0.57
CHRNB1P11230 AL049840.3-201ENST00000602669 611 ntBASIC18.6■□□□□ 0.57
CHRNB1P11230 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.6■□□□□ 0.57
CHRNB1P11230 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB1P11230 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CHRNB1P11230 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB1P11230 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRNB1P11230 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB1P11230 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB1P11230 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms