Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM3P06753 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM3P06753 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM3P06753 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.67■□□□□ 0.9
TPM3P06753 TNRC18P3-201ENST00000441896 2691 ntBASIC20.67■□□□□ 0.9
TPM3P06753 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM3P06753 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TPM3P06753 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM3P06753 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.67■□□□□ 0.9
TPM3P06753 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM3P06753 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TPM3P06753 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPM3P06753 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TPM3P06753 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TPM3P06753 AD000864.1-201ENST00000624076 2295 ntBASIC20.66■□□□□ 0.9
TPM3P06753 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TPM3P06753 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.66■□□□□ 0.9
TPM3P06753 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.66■□□□□ 0.9
TPM3P06753 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPM3P06753 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPM3P06753 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TPM3P06753 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.66■□□□□ 0.9
TPM3P06753 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.66■□□□□ 0.9
TPM3P06753 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPM3P06753 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPM3P06753 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.66■□□□□ 0.9
TPM3P06753 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPM3P06753 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.66■□□□□ 0.9
TPM3P06753 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPM3P06753 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
TPM3P06753 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TPM3P06753 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 AC108860.2-201ENST00000562760 2183 ntBASIC20.65■□□□□ 0.9
TPM3P06753 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TPM3P06753 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.65■□□□□ 0.9
TPM3P06753 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.65■□□□□ 0.9
TPM3P06753 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TPM3P06753 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 AC112777.1-201ENST00000540175 1423 ntBASIC20.65■□□□□ 0.9
TPM3P06753 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
TPM3P06753 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
TPM3P06753 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC20.65■□□□□ 0.9
TPM3P06753 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 C1QL1P1-201ENST00000568105 661 ntBASIC20.65■□□□□ 0.9
TPM3P06753 AL137784.2-201ENST00000607332 1000 ntBASIC20.65■□□□□ 0.9
TPM3P06753 AC004264.1-201ENST00000608354 794 ntBASIC20.65■□□□□ 0.9
TPM3P06753 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.65■□□□□ 0.9
TPM3P06753 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TPM3P06753 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
TPM3P06753 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
TPM3P06753 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM3P06753 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.64■□□□□ 0.9
TPM3P06753 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.64■□□□□ 0.9
TPM3P06753 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TPM3P06753 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TPM3P06753 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
TPM3P06753 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPM3P06753 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.64■□□□□ 0.89
TPM3P06753 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TPM3P06753 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.64■□□□□ 0.89
TPM3P06753 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TPM3P06753 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPM3P06753 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TPM3P06753 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TPM3P06753 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
TPM3P06753 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.64■□□□□ 0.89
TPM3P06753 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TPM3P06753 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.64■□□□□ 0.89
TPM3P06753 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.64■□□□□ 0.89
TPM3P06753 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPM3P06753 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.64■□□□□ 0.89
TPM3P06753 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TPM3P06753 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.64■□□□□ 0.89
TPM3P06753 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPM3P06753 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TPM3P06753 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.64■□□□□ 0.89
TPM3P06753 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TPM3P06753 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM3P06753 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM3P06753 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
TPM3P06753 MTMR9LP-203ENST00000426597 1545 ntBASIC20.63■□□□□ 0.89
TPM3P06753 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TPM3P06753 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.63■□□□□ 0.89
TPM3P06753 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.63■□□□□ 0.89
TPM3P06753 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM3P06753 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms