Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE6O95741 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CPNE6O95741 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE6O95741 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE6O95741 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE6O95741 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.06■□□□□ 0.48
CPNE6O95741 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.06■□□□□ 0.48
CPNE6O95741 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.06■□□□□ 0.48
CPNE6O95741 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.06■□□□□ 0.48
CPNE6O95741 ATP5G2P1-201ENST00000433580 426 ntBASIC18.06■□□□□ 0.48
CPNE6O95741 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE6O95741 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.06■□□□□ 0.48
CPNE6O95741 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.06■□□□□ 0.48
CPNE6O95741 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CPNE6O95741 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CPNE6O95741 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CPNE6O95741 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.06■□□□□ 0.48
CPNE6O95741 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CPNE6O95741 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CPNE6O95741 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CPNE6O95741 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE6O95741 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CPNE6O95741 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE6O95741 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE6O95741 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.05■□□□□ 0.48
CPNE6O95741 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
CPNE6O95741 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CPNE6O95741 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.05■□□□□ 0.48
CPNE6O95741 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 DUSP5P1-201ENST00000441325 1139 ntBASIC18.05■□□□□ 0.48
CPNE6O95741 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CPNE6O95741 SEC1P-202ENST00000473944 940 ntBASIC18.05■□□□□ 0.48
CPNE6O95741 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE6O95741 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE6O95741 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CPNE6O95741 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.05■□□□□ 0.48
CPNE6O95741 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.05■□□□□ 0.48
CPNE6O95741 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CPNE6O95741 AL109659.2-201ENST00000606809 1674 ntBASIC18.05■□□□□ 0.48
CPNE6O95741 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.05■□□□□ 0.48
CPNE6O95741 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE6O95741 NOC2LP1-202ENST00000452600 2235 ntBASIC18.04■□□□□ 0.48
CPNE6O95741 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CPNE6O95741 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE6O95741 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE6O95741 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE6O95741 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE6O95741 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE6O95741 TEX21P-204ENST00000641479 1693 ntBASIC18.04■□□□□ 0.48
CPNE6O95741 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE6O95741 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE6O95741 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE6O95741 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CPNE6O95741 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.04■□□□□ 0.48
CPNE6O95741 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.04■□□□□ 0.48
CPNE6O95741 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
CPNE6O95741 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE6O95741 CLEC4GP1-201ENST00000596555 870 ntBASIC18.04■□□□□ 0.48
CPNE6O95741 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.04■□□□□ 0.48
CPNE6O95741 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE6O95741 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.04■□□□□ 0.48
CPNE6O95741 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CPNE6O95741 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CPNE6O95741 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.04■□□□□ 0.48
CPNE6O95741 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE6O95741 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE6O95741 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE6O95741 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE6O95741 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms