Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE3O75131 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.67■□□□□ 0.42
CPNE3O75131 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE3O75131 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.67■□□□□ 0.42
CPNE3O75131 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE3O75131 AL157888.1-201ENST00000631930 593 ntBASIC17.67■□□□□ 0.42
CPNE3O75131 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CPNE3O75131 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CPNE3O75131 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CPNE3O75131 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE3O75131 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE3O75131 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE3O75131 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE3O75131 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE3O75131 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE3O75131 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CPNE3O75131 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE3O75131 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CPNE3O75131 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE3O75131 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE3O75131 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE3O75131 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CPNE3O75131 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE3O75131 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.66■□□□□ 0.42
CPNE3O75131 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CPNE3O75131 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CPNE3O75131 AL136038.4-201ENST00000603606 1261 ntBASIC17.66■□□□□ 0.42
CPNE3O75131 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.66■□□□□ 0.42
CPNE3O75131 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CPNE3O75131 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE3O75131 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE3O75131 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE3O75131 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE3O75131 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE3O75131 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE3O75131 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE3O75131 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CPNE3O75131 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CPNE3O75131 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE3O75131 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE3O75131 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CPNE3O75131 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE3O75131 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE3O75131 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE3O75131 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE3O75131 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE3O75131 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE3O75131 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.65■□□□□ 0.42
CPNE3O75131 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE3O75131 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE3O75131 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE3O75131 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.65■□□□□ 0.42
CPNE3O75131 MIR564-202ENST00000385049 94 ntBASIC17.65■□□□□ 0.42
CPNE3O75131 ATP5G2P1-201ENST00000433580 426 ntBASIC17.65■□□□□ 0.42
CPNE3O75131 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CPNE3O75131 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE3O75131 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.65■□□□□ 0.42
CPNE3O75131 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.65■□□□□ 0.42
CPNE3O75131 AC104390.1-201ENST00000555663 520 ntBASIC17.65■□□□□ 0.42
CPNE3O75131 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE3O75131 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE3O75131 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE3O75131 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CPNE3O75131 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE3O75131 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE3O75131 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE3O75131 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CPNE3O75131 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE3O75131 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CPNE3O75131 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CPNE3O75131 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE3O75131 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE3O75131 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE3O75131 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE3O75131 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE3O75131 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE3O75131 AC034236.2-201ENST00000606662 1610 ntBASIC17.65■□□□□ 0.42
CPNE3O75131 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CPNE3O75131 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.64■□□□□ 0.42
CPNE3O75131 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CPNE3O75131 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CPNE3O75131 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CPNE3O75131 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.64■□□□□ 0.41
CPNE3O75131 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.64■□□□□ 0.41
CPNE3O75131 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE3O75131 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms