Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CTNND1O60716 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTNND1O60716 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTNND1O60716 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTNND1O60716 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.48■■□□□ 1.03
CTNND1O60716 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.48■■□□□ 1.03
CTNND1O60716 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.48■■□□□ 1.03
CTNND1O60716 AC023511.2-201ENST00000618803 211 ntBASIC21.48■■□□□ 1.03
CTNND1O60716 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CTNND1O60716 TP73-AS1-207ENST00000624167 988 ntBASIC21.48■■□□□ 1.03
CTNND1O60716 AC083906.6-201ENST00000641366 219 ntBASIC21.48■■□□□ 1.03
CTNND1O60716 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.48■■□□□ 1.03
CTNND1O60716 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CTNND1O60716 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTNND1O60716 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CTNND1O60716 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTNND1O60716 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTNND1O60716 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
CTNND1O60716 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTNND1O60716 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTNND1O60716 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTNND1O60716 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.47■■□□□ 1.03
CTNND1O60716 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CTNND1O60716 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTNND1O60716 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CTNND1O60716 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.47■■□□□ 1.03
CTNND1O60716 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTNND1O60716 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CTNND1O60716 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.47■■□□□ 1.03
CTNND1O60716 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.47■■□□□ 1.03
CTNND1O60716 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.47■■□□□ 1.03
CTNND1O60716 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTNND1O60716 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTNND1O60716 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTNND1O60716 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CTNND1O60716 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CTNND1O60716 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.47■■□□□ 1.03
CTNND1O60716 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.47■■□□□ 1.03
CTNND1O60716 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.47■■□□□ 1.03
CTNND1O60716 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.47■■□□□ 1.03
CTNND1O60716 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CTNND1O60716 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CTNND1O60716 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
CTNND1O60716 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTNND1O60716 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
CTNND1O60716 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.47■■□□□ 1.03
CTNND1O60716 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTNND1O60716 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTNND1O60716 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTNND1O60716 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTNND1O60716 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.46■■□□□ 1.03
CTNND1O60716 AC009102.3-201ENST00000623118 1491 ntBASIC21.46■■□□□ 1.03
CTNND1O60716 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTNND1O60716 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CTNND1O60716 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTNND1O60716 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTNND1O60716 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTNND1O60716 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTNND1O60716 RNA5SP419-201ENST00000515908 135 ntBASIC21.46■■□□□ 1.03
CTNND1O60716 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.46■■□□□ 1.03
CTNND1O60716 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.46■■□□□ 1.03
CTNND1O60716 AC114341.1-201ENST00000618070 349 ntBASIC21.46■■□□□ 1.03
CTNND1O60716 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTNND1O60716 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTNND1O60716 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTNND1O60716 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTNND1O60716 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTNND1O60716 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CTNND1O60716 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTNND1O60716 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.45■■□□□ 1.03
CTNND1O60716 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
CTNND1O60716 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTNND1O60716 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTNND1O60716 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.45■■□□□ 1.02
CTNND1O60716 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.45■■□□□ 1.02
CTNND1O60716 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CTNND1O60716 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTNND1O60716 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTNND1O60716 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CTNND1O60716 AL590627.1-203ENST00000421194 1026 ntBASIC21.45■■□□□ 1.02
CTNND1O60716 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.45■■□□□ 1.02
CTNND1O60716 AC120114.3-201ENST00000611923 658 ntBASIC21.45■■□□□ 1.02
CTNND1O60716 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.45■■□□□ 1.02
CTNND1O60716 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTNND1O60716 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTNND1O60716 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.45■■□□□ 1.02
CTNND1O60716 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTNND1O60716 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
CTNND1O60716 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTNND1O60716 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTNND1O60716 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTNND1O60716 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.44■■□□□ 1.02
CTNND1O60716 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTNND1O60716 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CTNND1O60716 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTNND1O60716 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.44■■□□□ 1.02
CTNND1O60716 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CTNND1O60716 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTNND1O60716 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTNND1O60716 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms