Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN3O60637 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN3O60637 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN3O60637 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TSPAN3O60637 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.96■□□□□ 0.63
TSPAN3O60637 AC009065.1-201ENST00000564055 1225 ntBASIC18.96■□□□□ 0.63
TSPAN3O60637 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.96■□□□□ 0.63
TSPAN3O60637 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.96■□□□□ 0.63
TSPAN3O60637 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.96■□□□□ 0.63
TSPAN3O60637 AC112777.1-201ENST00000540175 1423 ntBASIC18.96■□□□□ 0.63
TSPAN3O60637 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN3O60637 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.96■□□□□ 0.63
TSPAN3O60637 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN3O60637 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.96■□□□□ 0.63
TSPAN3O60637 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN3O60637 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN3O60637 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN3O60637 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN3O60637 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN3O60637 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN3O60637 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TSPAN3O60637 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TSPAN3O60637 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TSPAN3O60637 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.95■□□□□ 0.62
TSPAN3O60637 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.95■□□□□ 0.62
TSPAN3O60637 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.95■□□□□ 0.62
TSPAN3O60637 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TSPAN3O60637 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TSPAN3O60637 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TSPAN3O60637 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TSPAN3O60637 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.95■□□□□ 0.62
TSPAN3O60637 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.95■□□□□ 0.62
TSPAN3O60637 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.95■□□□□ 0.62
TSPAN3O60637 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.95■□□□□ 0.62
TSPAN3O60637 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TSPAN3O60637 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TSPAN3O60637 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.95■□□□□ 0.62
TSPAN3O60637 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TSPAN3O60637 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN3O60637 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN3O60637 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN3O60637 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TSPAN3O60637 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TSPAN3O60637 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN3O60637 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN3O60637 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN3O60637 TSPY22P-201ENST00000427496 604 ntBASIC18.94■□□□□ 0.62
TSPAN3O60637 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TSPAN3O60637 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN3O60637 BX276092.5-203ENST00000456199 560 ntBASIC18.94■□□□□ 0.62
TSPAN3O60637 AP003733.1-201ENST00000491725 852 ntBASIC18.94■□□□□ 0.62
TSPAN3O60637 KRT18P56-201ENST00000507275 550 ntBASIC18.94■□□□□ 0.62
TSPAN3O60637 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.94■□□□□ 0.62
TSPAN3O60637 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TSPAN3O60637 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN3O60637 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN3O60637 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN3O60637 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
TSPAN3O60637 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.94■□□□□ 0.62
TSPAN3O60637 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.94■□□□□ 0.62
TSPAN3O60637 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN3O60637 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TSPAN3O60637 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN3O60637 AC016734.2-201ENST00000624325 1377 ntBASIC18.93■□□□□ 0.62
TSPAN3O60637 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TSPAN3O60637 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN3O60637 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN3O60637 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.93■□□□□ 0.62
TSPAN3O60637 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN3O60637 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
TSPAN3O60637 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.93■□□□□ 0.62
TSPAN3O60637 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN3O60637 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN3O60637 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN3O60637 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.93■□□□□ 0.62
TSPAN3O60637 KRT18P48-201ENST00000434763 852 ntBASIC18.93■□□□□ 0.62
TSPAN3O60637 HCG4P8-203ENST00000443049 980 ntBASIC18.93■□□□□ 0.62
TSPAN3O60637 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TSPAN3O60637 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TSPAN3O60637 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.93■□□□□ 0.62
TSPAN3O60637 AC024563.2-201ENST00000603282 481 ntBASIC18.93■□□□□ 0.62
TSPAN3O60637 AC092119.3-201ENST00000612618 583 ntBASIC18.93■□□□□ 0.62
TSPAN3O60637 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN3O60637 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN3O60637 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN3O60637 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN3O60637 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TSPAN3O60637 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN3O60637 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN3O60637 AC093525.10-201ENST00000625130 1569 ntBASIC18.93■□□□□ 0.62
TSPAN3O60637 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN3O60637 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
TSPAN3O60637 Z83836.1-201ENST00000624605 1642 ntBASIC18.92■□□□□ 0.62
TSPAN3O60637 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN3O60637 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN3O60637 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TSPAN3O60637 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.92■□□□□ 0.62
TSPAN3O60637 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN3O60637 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN3O60637 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms