Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.92■□□□□ 0.94
CCNT1O60563 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNT1O60563 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
CCNT1O60563 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
CCNT1O60563 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCNT1O60563 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCNT1O60563 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.92■□□□□ 0.94
CCNT1O60563 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.92■□□□□ 0.94
CCNT1O60563 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCNT1O60563 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CCNT1O60563 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCNT1O60563 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCNT1O60563 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.91■□□□□ 0.94
CCNT1O60563 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNT1O60563 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNT1O60563 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNT1O60563 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNT1O60563 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.91■□□□□ 0.94
CCNT1O60563 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNT1O60563 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.91■□□□□ 0.94
CCNT1O60563 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNT1O60563 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.91■□□□□ 0.94
CCNT1O60563 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
CCNT1O60563 AC092647.4-201ENST00000457211 535 ntBASIC20.91■□□□□ 0.94
CCNT1O60563 AL359075.1-203ENST00000462729 1002 ntBASIC20.91■□□□□ 0.94
CCNT1O60563 AC063952.2-201ENST00000498792 1227 ntBASIC20.91■□□□□ 0.94
CCNT1O60563 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.91■□□□□ 0.94
CCNT1O60563 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNT1O60563 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNT1O60563 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.91■□□□□ 0.94
CCNT1O60563 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CCNT1O60563 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNT1O60563 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCNT1O60563 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.91■□□□□ 0.94
CCNT1O60563 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNT1O60563 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNT1O60563 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNT1O60563 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNT1O60563 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.9■□□□□ 0.94
CCNT1O60563 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNT1O60563 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.9■□□□□ 0.94
CCNT1O60563 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNT1O60563 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCNT1O60563 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.9■□□□□ 0.94
CCNT1O60563 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCNT1O60563 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNT1O60563 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNT1O60563 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNT1O60563 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCNT1O60563 STARP1-201ENST00000397973 869 ntBASIC20.9■□□□□ 0.94
CCNT1O60563 KRT18P38-201ENST00000449496 1282 ntBASIC20.9■□□□□ 0.94
CCNT1O60563 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNT1O60563 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.9■□□□□ 0.94
CCNT1O60563 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNT1O60563 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
CCNT1O60563 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNT1O60563 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNT1O60563 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCNT1O60563 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNT1O60563 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNT1O60563 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNT1O60563 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.9■□□□□ 0.94
CCNT1O60563 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.9■□□□□ 0.94
CCNT1O60563 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.9■□□□□ 0.94
CCNT1O60563 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCNT1O60563 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.89■□□□□ 0.94
CCNT1O60563 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCNT1O60563 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
CCNT1O60563 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCNT1O60563 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCNT1O60563 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.89■□□□□ 0.93
CCNT1O60563 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.89■□□□□ 0.93
CCNT1O60563 HOMER2P1-201ENST00000455653 964 ntBASIC20.89■□□□□ 0.93
CCNT1O60563 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCNT1O60563 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.89■□□□□ 0.93
CCNT1O60563 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.89■□□□□ 0.93
CCNT1O60563 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCNT1O60563 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCNT1O60563 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.89■□□□□ 0.93
CCNT1O60563 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.89■□□□□ 0.93
CCNT1O60563 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.89■□□□□ 0.93
CCNT1O60563 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCNT1O60563 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCNT1O60563 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCNT1O60563 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCNT1O60563 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.89■□□□□ 0.93
CCNT1O60563 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
CCNT1O60563 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNT1O60563 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.88■□□□□ 0.93
CCNT1O60563 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCNT1O60563 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCNT1O60563 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCNT1O60563 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCNT1O60563 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
CCNT1O60563 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCNT1O60563 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCNT1O60563 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.88■□□□□ 0.93
CCNT1O60563 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.88■□□□□ 0.93
CCNT1O60563 AC022616.7-201ENST00000525383 220 ntBASIC20.88■□□□□ 0.93
CCNT1O60563 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms