Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.66■□□□□ 0.42
PRICKLE3O43900 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.66■□□□□ 0.42
PRICKLE3O43900 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.66■□□□□ 0.42
PRICKLE3O43900 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.66■□□□□ 0.42
PRICKLE3O43900 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.66■□□□□ 0.42
PRICKLE3O43900 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRICKLE3O43900 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.65■□□□□ 0.42
PRICKLE3O43900 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRICKLE3O43900 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
PRICKLE3O43900 LINC01126-201ENST00000623515 1646 ntBASIC17.65■□□□□ 0.42
PRICKLE3O43900 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
PRICKLE3O43900 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.65■□□□□ 0.42
PRICKLE3O43900 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRICKLE3O43900 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRICKLE3O43900 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRICKLE3O43900 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.65■□□□□ 0.42
PRICKLE3O43900 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.65■□□□□ 0.42
PRICKLE3O43900 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.65■□□□□ 0.42
PRICKLE3O43900 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
PRICKLE3O43900 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.65■□□□□ 0.42
PRICKLE3O43900 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.65■□□□□ 0.42
PRICKLE3O43900 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.65■□□□□ 0.42
PRICKLE3O43900 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRICKLE3O43900 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRICKLE3O43900 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRICKLE3O43900 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRICKLE3O43900 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRICKLE3O43900 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
PRICKLE3O43900 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PRICKLE3O43900 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRICKLE3O43900 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PRICKLE3O43900 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRICKLE3O43900 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRICKLE3O43900 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.64■□□□□ 0.41
PRICKLE3O43900 KRT89P-201ENST00000620027 1478 ntBASIC17.64■□□□□ 0.41
PRICKLE3O43900 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRICKLE3O43900 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRICKLE3O43900 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRICKLE3O43900 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRICKLE3O43900 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRICKLE3O43900 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PRICKLE3O43900 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.64■□□□□ 0.41
PRICKLE3O43900 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRICKLE3O43900 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.64■□□□□ 0.41
PRICKLE3O43900 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
PRICKLE3O43900 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.64■□□□□ 0.41
PRICKLE3O43900 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.64■□□□□ 0.41
PRICKLE3O43900 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.64■□□□□ 0.41
PRICKLE3O43900 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.64■□□□□ 0.41
PRICKLE3O43900 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.64■□□□□ 0.41
PRICKLE3O43900 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.64■□□□□ 0.41
PRICKLE3O43900 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PRICKLE3O43900 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRICKLE3O43900 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.64■□□□□ 0.41
PRICKLE3O43900 AC005332.1-201ENST00000577698 1310 ntBASIC17.64■□□□□ 0.41
PRICKLE3O43900 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRICKLE3O43900 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRICKLE3O43900 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.64■□□□□ 0.41
PRICKLE3O43900 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRICKLE3O43900 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.64■□□□□ 0.41
PRICKLE3O43900 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRICKLE3O43900 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PRICKLE3O43900 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.63■□□□□ 0.41
PRICKLE3O43900 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.63■□□□□ 0.41
PRICKLE3O43900 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.63■□□□□ 0.41
PRICKLE3O43900 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.63■□□□□ 0.41
PRICKLE3O43900 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.63■□□□□ 0.41
PRICKLE3O43900 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.63■□□□□ 0.41
PRICKLE3O43900 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.63■□□□□ 0.41
PRICKLE3O43900 AC024563.2-201ENST00000603282 481 ntBASIC17.63■□□□□ 0.41
PRICKLE3O43900 AC116407.4-201ENST00000623319 1061 ntBASIC17.63■□□□□ 0.41
PRICKLE3O43900 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PRICKLE3O43900 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PRICKLE3O43900 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.63■□□□□ 0.41
PRICKLE3O43900 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRICKLE3O43900 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms