Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 MIR3180-4-201ENST00000582223 153 ntBASIC16.42■□□□□ 0.22
TRAF3IP2O43734 AC024243.1-201ENST00000609234 778 ntBASIC16.42■□□□□ 0.22
TRAF3IP2O43734 AC005363.2-201ENST00000618631 242 ntBASIC16.42■□□□□ 0.22
TRAF3IP2O43734 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 AC009102.3-201ENST00000623118 1491 ntBASIC16.42■□□□□ 0.22
TRAF3IP2O43734 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP2O43734 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 AC099343.3-201ENST00000605834 2503 ntBASIC16.41■□□□□ 0.22
TRAF3IP2O43734 TERF1P1-201ENST00000311003 1181 ntBASIC16.41■□□□□ 0.22
TRAF3IP2O43734 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 AP000523.1-201ENST00000398242 1049 ntBASIC16.41■□□□□ 0.22
TRAF3IP2O43734 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 SDHAP2-201ENST00000455183 2001 ntBASIC16.41■□□□□ 0.22
TRAF3IP2O43734 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP2O43734 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 LIN28AP1-201ENST00000429574 405 ntBASIC16.4■□□□□ 0.22
TRAF3IP2O43734 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 AC009065.1-201ENST00000564055 1225 ntBASIC16.4■□□□□ 0.22
TRAF3IP2O43734 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.4■□□□□ 0.22
TRAF3IP2O43734 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAF3IP2O43734 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms