Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.29■□□□□ 0.36
RRP8O43159 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.29■□□□□ 0.36
RRP8O43159 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.29■□□□□ 0.36
RRP8O43159 AL356488.2-201ENST00000602755 427 ntBASIC17.29■□□□□ 0.36
RRP8O43159 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.29■□□□□ 0.36
RRP8O43159 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.29■□□□□ 0.36
RRP8O43159 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RRP8O43159 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.29■□□□□ 0.36
RRP8O43159 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RRP8O43159 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RRP8O43159 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RRP8O43159 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RRP8O43159 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RRP8O43159 AC099778.1-201ENST00000568593 1911 ntBASIC17.29■□□□□ 0.36
RRP8O43159 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RRP8O43159 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RRP8O43159 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.29■□□□□ 0.36
RRP8O43159 AC034236.2-201ENST00000606662 1610 ntBASIC17.29■□□□□ 0.36
RRP8O43159 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.28■□□□□ 0.36
RRP8O43159 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RRP8O43159 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.28■□□□□ 0.36
RRP8O43159 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RRP8O43159 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RRP8O43159 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RRP8O43159 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.28■□□□□ 0.36
RRP8O43159 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RRP8O43159 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RRP8O43159 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RRP8O43159 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.28■□□□□ 0.36
RRP8O43159 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.28■□□□□ 0.36
RRP8O43159 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.28■□□□□ 0.36
RRP8O43159 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RRP8O43159 RPSAP43-201ENST00000402237 625 ntBASIC17.28■□□□□ 0.36
RRP8O43159 GPX1P2-201ENST00000429271 606 ntBASIC17.28■□□□□ 0.36
RRP8O43159 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RRP8O43159 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.28■□□□□ 0.36
RRP8O43159 AC145285.3-201ENST00000564603 959 ntBASIC17.28■□□□□ 0.36
RRP8O43159 MTDHP3-201ENST00000594186 672 ntBASIC17.28■□□□□ 0.36
RRP8O43159 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.28■□□□□ 0.36
RRP8O43159 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.28■□□□□ 0.36
RRP8O43159 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RRP8O43159 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.28■□□□□ 0.36
RRP8O43159 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RRP8O43159 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RRP8O43159 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.28■□□□□ 0.36
RRP8O43159 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RRP8O43159 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RRP8O43159 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RRP8O43159 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RRP8O43159 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RRP8O43159 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RRP8O43159 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RRP8O43159 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RRP8O43159 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.27■□□□□ 0.36
RRP8O43159 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RRP8O43159 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RRP8O43159 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RRP8O43159 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.27■□□□□ 0.36
RRP8O43159 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RRP8O43159 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RRP8O43159 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RRP8O43159 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RRP8O43159 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RRP8O43159 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RRP8O43159 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RRP8O43159 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.27■□□□□ 0.36
RRP8O43159 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
RRP8O43159 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.27■□□□□ 0.36
RRP8O43159 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RRP8O43159 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RRP8O43159 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.27■□□□□ 0.36
RRP8O43159 AC004967.1-201ENST00000453589 447 ntBASIC17.27■□□□□ 0.36
RRP8O43159 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.27■□□□□ 0.36
RRP8O43159 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RRP8O43159 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.27■□□□□ 0.36
RRP8O43159 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.27■□□□□ 0.36
RRP8O43159 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RRP8O43159 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
RRP8O43159 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RRP8O43159 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.27■□□□□ 0.36
RRP8O43159 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.27■□□□□ 0.36
RRP8O43159 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.27■□□□□ 0.35
RRP8O43159 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.27■□□□□ 0.35
RRP8O43159 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RRP8O43159 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.27■□□□□ 0.35
RRP8O43159 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RRP8O43159 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RRP8O43159 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RRP8O43159 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RRP8O43159 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.26■□□□□ 0.35
RRP8O43159 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RRP8O43159 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RRP8O43159 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RRP8O43159 AL512353.2-201ENST00000448759 1962 ntBASIC17.26■□□□□ 0.35
RRP8O43159 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RRP8O43159 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
RRP8O43159 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RRP8O43159 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RRP8O43159 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RRP8O43159 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms